prot_Ecto-sp13_S_contig13313.2655.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13313.2655.1
Unique Nameprot_Ecto-sp13_S_contig13313.2655.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length501
Homology
BLAST of mRNA_Ecto-sp13_S_contig13313.2655.1 vs. uniprot
Match: D8LM05_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM05_ECTSI)

HSP 1 Score: 716 bits (1848), Expect = 1.270e-252
Identity = 440/523 (84.13%), Postives = 451/523 (86.23%), Query Frame = 0
Query:    1 MSHGADARAVNHLGETPLDLGSRLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVPANLPSVKEEATGTGEXXXXXXXXXXXXXXXXR------------------TTAPKTTTARGVTFSPSRRNRRAKKCSEIARSRLPYVSSASLSSAAPSFGEGRCRSNSGGGIGGVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDG-AHGGXXXXXXXXRERRQAGGV----GAVHFKDYRMGRSSAVLVSGXXXXXXLKRGRGTARPASCPVPGGIDEGRGPGTPGSRVSSSTXXXXXXXXXXXXXXXXXXXXXEMRGGSSNDGCRGDGGARVVGTRQRHGGGHSARGEQSERQGARRRPEKGERAPGSMPDSEARRQIWQWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTGYISCSRFSKLVVRGRLQPLAAGKACTRRCFGGVPFFLMVRFSAGLRCERTR 500
            MSHGADARAVNHLGETPLDLG RLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVPANLPSVKEEAT    XXXXXXXXX       R                  TTAPKTTTARGVTFSPSRRNRRAKK  EIA+SRLPYVSSASLSSAAPSFGEGRCRS+SGGG GGVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDG AHG XXXXXXXX             G VHFKDYRMGRSSAVLVSGXXXX  LKRGRGT RPASCP+PGG+DEGRGPGTPGSRV+SS      XXXXXXXXXXXXXXXX M   S+N+GCRGDGGARVVGTRQRH G HSARGEQSER  ARRR E+GERAPGSMPDSEARRQIW+WLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTGY+SCSR SKLVVRGRLQPLAAGK+ TRRC GGVPFFL V FSAGLRCERTR
Sbjct:  200 MSHGADARAVNHLGETPLDLGFRLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVPANLPSVKEEATRXXXXXXXXXXXXVARTTGLRGAPPVATAGTAAVXXXXXTTAPKTTTARGVTFSPSRRNRRAKKRYEIAKSRLPYVSSASLSSAAPSFGEGRCRSSSGGGRGGVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDGGAHGXXXXXXXXXXXXXXXXXXXXXXGGVHFKDYRMGRSSAVLVSGXXXXG-LKRGRGTTRPASCPMPGGVDEGRGPGTPGSRVTSSAKGAGQXXXXXXXXXXXXXXXXXMXXXSTNNGCRGDGGARVVGTRQRHSGRHSARGEQSERPCARRRREEGERAPGSMPDSEARRQIWEWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTGYVSCSRLSKLVVRGRLQPLAAGKSRTRRCSGGVPFFLTVWFSAGLRCERTR 721          
BLAST of mRNA_Ecto-sp13_S_contig13313.2655.1 vs. uniprot
Match: A0A6H5JR91_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR91_9PHAE)

HSP 1 Score: 615 bits (1585), Expect = 9.190e-213
Identity = 381/453 (84.11%), Postives = 386/453 (85.21%), Query Frame = 0
Query:    1 MSHGADARAVNHLGETPLDLGSRLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVPANLPSVKEEATGT----GEXXXXXXXXXXXXXXXXRTTAPKTTTARGVTFSPSRRNRRAKKCSEIARSRLPYVSSASLSSAAPSFGEGRCRSNSGGGIGGVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDGAHGGXXXXXXXXRERRQAGGVGAVHFKDYRMGRSSAVLVSGXXXXXXLKRGRGTARPASCPVPGGIDEGRGPGTPGSRVSSSTXXXXXXXXXXXXXXXXXXXXXEMRGGSSNDGCRGDGGARVVGTRQRHGGGHSARGEQSERQGARRRPEKGERAPGSMPDSEARRQIWQWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTG 449
            MSHGADARAVNHLGETPLDLGSRLT GFPK RSLLL ILDSSKYQIAGGTIFIVPANLPSVKEE TG       XXXXXXXXXXXXXXXX        TARGVTFSPSRRNRRAKK  EIA+SRLPYVSSASLSSAAPSFGEGRCRS+SGGG GGV TPALPRGDHETALGGARHRLAAGHGARCSRNDHDGAHG         RE RQAGG   VHFKDYRMGRSSAVLVS       LKR RG ARPASCPVPGGIDEGRGPGTPGSRV+SS       XXXXXXXXXXXXXXX         GCRGDGG RVVGTRQRHGG HSAR EQSER GARRR E+GERA GSMPDSEARRQIW+WLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTG
Sbjct:  272 MSHGADARAVNHLGETPLDLGSRLTGGFPKFRSLLLPILDSSKYQIAGGTIFIVPANLPSVKEEVTGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARGVTFSPSRRNRRAKKRYEIAKSRLPYVSSASLSSAAPSFGEGRCRSSSGGGRGGVTTPALPRGDHETALGGARHRLAAGHGARCSRNDHDGAHG--RGGGGAARECRQAGGASGVHFKDYRMGRSSAVLVSSSGGGG-LKRWRGAARPASCPVPGGIDEGRGPGTPGSRVASSATGAGQRXXXXXXXXXXXXXXXXXXXXXXXXGCRGDGGVRVVGTRQRHGGRHSAREEQSERPGARRRREEGERALGSMPDSEARRQIWEWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTG 721          
BLAST of mRNA_Ecto-sp13_S_contig13313.2655.1 vs. uniprot
Match: A0A835YHJ9_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHJ9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.240e-7
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MSHGADARAVNHLGETPLDLGSRLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVP 55
            M+ GADAR  +  G T LDL +R T+G+P+++ LL+ +LDSSKYQ+ G  ++IVP
Sbjct:  433 MARGADARVADGAGRTALDLATRGTAGYPRAQRLLVGVLDSSKYQVEGDALYIVP 487          
BLAST of mRNA_Ecto-sp13_S_contig13313.2655.1 vs. uniprot
Match: A0A7S3XZT3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZT3_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 7.210e-6
Identity = 29/89 (32.58%), Postives = 49/89 (55.06%), Query Frame = 0
Query:  384 LVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTGYISCSRFSKLVVRGRLQPLAAGK 472
            L E S +VA    +++  A + +  D   EL+    L+  L RV + L   E ++L++E DPT +G+++  RF K +   RL+PL  G+
Sbjct:   98 LNERSDFVAFSGEAELLDAFRVLTADPGSELVPVATLKNFLTRVSEILTEEEAEDLIEEADPTQSGFVNYKRFIKHMRVSRLRPLPQGR 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13313.2655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LM05_ECTSI1.270e-25284.13Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JR91_9PHAE9.190e-21384.11PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835YHJ9_9STRA2.240e-750.91PH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S3XZT3_HETAK7.210e-632.58Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 377..467
e-value: 9.6E-7
score: 30.5
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 392..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13313contigEcto-sp13_S_contig13313:21..2102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13313.2655.1mRNA_Ecto-sp13_S_contig13313.2655.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13313 3..2102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13313.2655.1 ID=prot_Ecto-sp13_S_contig13313.2655.1|Name=mRNA_Ecto-sp13_S_contig13313.2655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=501bp
MSHGADARAVNHLGETPLDLGSRLTSGFPKSRSLLLSILDSSKYQIAGGT
IFIVPANLPSVKEEATGTGEEEDAGAGVSAAAAAAARTTAPKTTTARGVT
FSPSRRNRRAKKCSEIARSRLPYVSSASLSSAAPSFGEGRCRSNSGGGIG
GVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDGAHGGGRGGGGAA
RERRQAGGVGAVHFKDYRMGRSSAVLVSGGGGGGGLKRGRGTARPASCPV
PGGIDEGRGPGTPGSRVSSSTTGAGQRRRRRRPATTTPGGGTEMRGGSSN
DGCRGDGGARVVGTRQRHGGGHSARGEQSERQGARRRPEKGERAPGSMPD
SEARRQIWQWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVY
RALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTGY
ISCSRFSKLVVRGRLQPLAAGKACTRRCFGGVPFFLMVRFSAGLRCERTR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair