prot_Ecto-sp13_S_contig13296.2641.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13296.2641.1
Unique Nameprot_Ecto-sp13_S_contig13296.2641.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13296.2641.1 vs. uniprot
Match: D8LDX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX2_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 6.680e-137
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0 
Query:    1 MAGALGVALGSTPVAGGAPNGIDKISGAGFQRGQDAFSLWTENGLPISRANKAEYVRLASKPARGKFKGGGKYEFSFNGPLLYGDVDVNRLTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLSKAGCDWSTSNLVVMSDDGCGDAPQRINTTRTKRSKPKRCISDYFDADSNEVLVRFHTRGSNEVVFIDYAHIKASFGFNPHSGGA 211
            M GALG+ALGSTP+  GAPNGI+KISGAGFQRGQD FSLWT+ GLP+SRANKAEYVRLAS+PARGKFKGGGK+EFSFNGPLLYGDVDVN LTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLS+AG DWSTSNLVVMSDDGCGDAP+RINTTRTKR KPKRCISDYFD DSNEVL+R HTR S EVVFIDYAHIKASFG NPH+GGA
Sbjct:    1 MVGALGLALGSTPLIAGAPNGIEKISGAGFQRGQDEFSLWTKEGLPVSRANKAEYVRLASRPARGKFKGGGKFEFSFNGPLLYGDVDVNTLTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLSEAGSDWSTSNLVVMSDDGCGDAPKRINTTRTKRWKPKRCISDYFDTDSNEVLIRVHTRESKEVVFIDYAHIKASFGLNPHAGGA 211
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13296.2641.1 vs. uniprot
Match: D8LDX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX1_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.330e-90
Identity = 133/171 (77.78%), Postives = 143/171 (83.63%), Query Frame = 0 
Query:   41 TENGLPISRANKAEYVRLASKPARGKFKGGGKYEFSFNGPLLYGDVDVNRLTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLSKAGCDWSTSNLVVMSDDGCGDAPQRINTTRTKRSKPKRCISDYFDADSNEVLVRFHTRGSNEVVFIDYAHIKASFGFNPHSGGA 211
            T  GLPISRAN   Y+RLASK A GKFKGG +YEFSF+ PLL+GDVD N LTLELSALV KGSGD WQVDMFN+RRGK+WDKIGDLSKAG DW+TSNLVV S D CGDAP+RINTTRTK  K KRCISDYFD DSNEVL+R HT GS EV+FIDYA IK SF FNPHSG A
Sbjct:    7 TGEGLPISRANDETYLRLASKSAGGKFKGG-QYEFSFSAPLLFGDVDANILTLELSALVMKGSGDRWQVDMFNSRRGKKWDKIGDLSKAGSDWTTSNLVVASGDRCGDAPKRINTTRTKSQKSKRCISDYFDTDSNEVLIRIHTPGSKEVIFIDYARIKPSFRFNPHSGHA 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13296.2641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDX2_ECTSI6.680e-13788.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDX1_ECTSI2.330e-9077.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14741GH114_assoccoord: 40..172
e-value: 3.3E-37
score: 127.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13296contigEcto-sp13_S_contig13296:674..3363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13296.2641.1mRNA_Ecto-sp13_S_contig13296.2641.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13296 674..3363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13296.2641.1 ID=prot_Ecto-sp13_S_contig13296.2641.1|Name=mRNA_Ecto-sp13_S_contig13296.2641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MAGALGVALGSTPVAGGAPNGIDKISGAGFQRGQDAFSLWTENGLPISRA
NKAEYVRLASKPARGKFKGGGKYEFSFNGPLLYGDVDVNRLTLELSALVK
KGSGDHWQVDMFNTRRGKRWDKIGDLSKAGCDWSTSNLVVMSDDGCGDAP
QRINTTRTKRSKPKRCISDYFDADSNEVLVRFHTRGSNEVVFIDYAHIKA
SFGFNPHSGGA*
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