prot_Ecto-sp13_S_contig13223.2605.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13223.2605.1
Unique Nameprot_Ecto-sp13_S_contig13223.2605.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13223.2605.1 vs. uniprot
Match: A0A6H5K9U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9U1_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 1.420e-154
Identity = 239/247 (96.76%), Postives = 241/247 (97.57%), Query Frame = 0 
Query:    1 DSSAAAAFRPTPVVVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSGATLQECFDIQ---VLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAGFRDRVTRAWQAVRDAGATMIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALVKLLGDDVLNEESEANVLRQ 244
            DSSAAAAFRPTP+VVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSG TLQECFDIQ   VLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAGFRDRVTRAWQAVRDAGA MIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAAL+KLL DDVLNEESEANVLRQ
Sbjct:  213 DSSAAAAFRPTPLVVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSGTTLQECFDIQANIVLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAGFRDRVTRAWQAVRDAGAIMIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALLKLLQDDVLNEESEANVLRQ 459
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13223.2605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9U1_9PHAE1.420e-15496.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 27..229
e-value: 1.2E-18
score: 66.7
NoneNo IPR availablePANTHERPTHR45923FAMILY NOT NAMEDcoord: 13..228
NoneNo IPR availablePANTHERPTHR45923:SF2PROTEIN SEY1coord: 13..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13223contigEcto-sp13_S_contig13223:2..4448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13223.2605.1mRNA_Ecto-sp13_S_contig13223.2605.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13223 2..4448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13223.2605.1 ID=prot_Ecto-sp13_S_contig13223.2605.1|Name=mRNA_Ecto-sp13_S_contig13223.2605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
DSSAAAAFRPTPVVVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSGA
TLQECFDIQVLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAGFRDRV
TRAWQAVRDAGATMIPAKSEMVALYKVDSAYGEVMGSADMQLKSWRQTVG
AGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETG
IKELYARQLSMLCARALKSYKAALVKLLGDDVLNEESEANVLRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1