prot_Ecto-sp13_S_contig13212.2601.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13212.2601.1
Unique Nameprot_Ecto-sp13_S_contig13212.2601.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 8.310e-29
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMF+GVICLETAMPAAVKERIVF
Sbjct: 1101 MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFVGVICLETAMPAAVKERIVF 1161          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: A0A6H5K7U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.860e-22
Identity = 48/61 (78.69%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            MRMQLAIL A+IFGSSFID+D ETE+D+ASRL VI+MSTMF+GVICL+TA+PA  KERIVF
Sbjct:  454 MRMQLAILMAVIFGSSFIDADIETESDLASRLAVIFMSTMFVGVICLQTAIPAGAKERIVF 514          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.870e-22
Identity = 48/61 (78.69%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            MRMQLAIL A+IFGSSFID+D ETE+D+ASRL VI+MSTMF+GVICL+TA+PA  KERIVF
Sbjct: 1189 MRMQLAILIAVIFGSSFIDADIETESDLASRLAVIFMSTMFVGVICLQTAIPAGAKERIVF 1249          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: D7FQN0_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN0_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 4.060e-13
Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            R+ LA++ AIIFG++ I  D E+EADV ++ GVIYMSTMF+G IC++TA+ A   ERIVF
Sbjct:  339 RIMLALVIAIIFGTASIGRDLESEADVGAQTGVIYMSTMFVGSICMQTAIAAGFLERIVF 398          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: K8YUH2_NANGC (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUH2_NANGC)

HSP 1 Score: 62.4 bits (150), Expect = 7.390e-10
Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            RM +++L A++FGS F D  ++TE D+  R+G++Y+ST F+G++ + + MP   KER  F
Sbjct:  711 RMFISVLVAVVFGSVFHDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAF 770          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: W7TP47_9STRA (Atp-binding cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP47_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.430e-10
Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            RM +++L A++FGS F D  ++TE D+  R+G++Y+ST F+G++ + + MP   KER  F
Sbjct: 1320 RMFISVLVAVVFGSVFHDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAF 1379          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: F0WSN4_9STRA (ATPbinding Cassette (ABC) Superfamily putative n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSN4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.540e-6
Identity = 21/57 (36.84%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKER 58
            R+ + I+ A++FG  F+ S+++T  ++ S LG++YM+T+F GV+   + +P A+ ER
Sbjct: 1088 RIIVFIILALLFGLIFVSSEYQTYQELNSALGMLYMTTVFAGVVSFNSVLPIAISER 1144          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: G4ZF76_PHYSP (Pleiotropic drug resistance protein ABC superfamily n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZF76_PHYSP)

HSP 1 Score: 52.4 bits (124), Expect = 2.540e-6
Identity = 22/60 (36.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIVF 61
            R+ +++L  ++FG  F D+D+ T   + S LG+I++ST+F+G++ L + +P A +ER  F
Sbjct: 1109 RLGISVLLGLVFGLLFSDADYTTYQGINSGLGLIFLSTVFVGLVALISVLPLAFEERATF 1168          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: A0A024FWI6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FWI6_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.750e-6
Identity = 22/57 (38.60%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKER 58
            R+ + I+ A++FG  F+ S++ T   V S LG++YM+T+F GV+   + +P A+ ER
Sbjct: 1089 RIIVFIILALLFGLIFVSSNYRTYQQVNSALGMLYMATVFAGVVSFNSVLPIAISER 1145          
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Match: A0A7S0WDH7_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WDH7_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 4.750e-6
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    2 RMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETAMPAAVKERIV 60
            R+ +  +  I+FG  ++D D   EA V S +  ++M+T+F G+IC+ T MP  ++ER V
Sbjct: 1148 RIGILTILYILFGVIYLDLDTSDEAGVQSMVACVFMTTIFTGIICMNTVMPVRIRERAV 1206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13212.2601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFP2_ECTSI8.310e-2998.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7U8_9PHAE1.860e-2278.69ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LFN4_ECTSI1.870e-2278.69Pleiotropic drug resistance transporter n=1 Tax=Ec... [more]
D7FQN0_ECTSI4.060e-1358.33ABC transporter domain-containing protein n=1 Tax=... [more]
K8YUH2_NANGC7.390e-1041.67Atp-binding cassette superfamily n=1 Tax=Nannochlo... [more]
W7TP47_9STRA7.430e-1041.67Atp-binding cassette superfamily n=2 Tax=Monodopsi... [more]
F0WSN4_9STRA2.540e-636.84ATPbinding Cassette (ABC) Superfamily putative n=2... [more]
G4ZF76_PHYSP2.540e-636.67Pleiotropic drug resistance protein ABC superfamil... [more]
A0A024FWI6_9STRA4.750e-638.60Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7S0WDH7_9CHLO4.750e-637.29Hypothetical protein (Fragment) n=2 Tax=Ostreococc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13212contigEcto-sp13_S_contig13212:2423..2845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13212.2601.1mRNA_Ecto-sp13_S_contig13212.2601.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13212 2393..2845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13212.2601.1 ID=prot_Ecto-sp13_S_contig13212.2601.1|Name=mRNA_Ecto-sp13_S_contig13212.2601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
MRMQLAILTAIIFGSSFIDSDFETEADVASRLGVIYMSTMFLGVICLETA
MPAAVKERIVF
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