prot_Ecto-sp13_S_contig13181.2581.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13181.2581.1
Unique Nameprot_Ecto-sp13_S_contig13181.2581.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp13_S_contig13181.2581.1 vs. uniprot
Match: A0A6H5JT31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT31_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 1.120e-168
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query:    1 MDDRNKAVLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIPDPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRVWPMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNKKY 239
            MDDRNKAVLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIPDPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRVWPMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNKKY
Sbjct:    1 MDDRNKAVLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIPDPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRVWPMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNKKY 239          
BLAST of mRNA_Ecto-sp13_S_contig13181.2581.1 vs. uniprot
Match: D7G0G8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G8_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 8.760e-124
Identity = 177/232 (76.29%), Postives = 199/232 (85.78%), Query Frame = 0
Query:    8 VLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIPDPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGRVWPMNMSADVARLYYLCAIRSNCGPFKYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNKKY 239
            +LA I+D+ID  FAKR G   AW+ GV+  EV+ LVS+ A + DPFAGFK+NPI + D+GCFNLPED D+LASRCLEGAATSDGG VG+PV N+G GAC WIALASGAL+ RCSTGGAALALRT AMRMALLK  EFLS DGYLAEYRS DLFD KEHDMV+KLAGR W  N+S DVAR+YYLCA+R+NCGPFKYSQQAV+PWAAEVLGLKVRVFHPAASVS VGGKWNK+Y
Sbjct:    1 MLARIKDAIDDLFAKRSG-ERAWEKGVTEAEVRHLVSMAAGLLDPFAGFKINPIRQGDTGCFNLPEDTDELASRCLEGAATSDGGQVGIPVANDGLGACVWIALASGALSERCSTGGAALALRTAAMRMALLKSPEFLSRDGYLAEYRSPDLFDLKEHDMVLKLAGREWTENISPDVARMYYLCAVRNNCGPFKYSQQAVIPWAAEVLGLKVRVFHPAASVSPVGGKWNKRY 231          
BLAST of mRNA_Ecto-sp13_S_contig13181.2581.1 vs. uniprot
Match: D7FV00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV00_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 1.900e-73
Identity = 118/167 (70.66%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    8 VLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIPDPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVNEGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGYLAEYRSGDLFDTKEHDMVMKLAGR 174
            + A I D+I   FA+R G   AW  GV+  +V+ LVS  AS+P PFAGFK+NPI + D+GCFNLPED D+LASRCLEGAATSDGG VGVPV N+  GAC WIALASG LN RCSTGG ALALRT AMRMALLK  EFLS DGYLAEYRS +LFD KEHDMV+KLAGR
Sbjct:    3 MFARIRDAIGDLFARRSG-ERAWGKGVNEAKVRHLVSTAASLPGPFAGFKINPIRQGDTGCFNLPEDTDELASRCLEGAATSDGGRVGVPVANDWSGACVWIALASGELNERCSTGGGALALRTAAMRMALLKSPEFLSRDGYLAEYRSPNLFDLKEHDMVLKLAGR 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13181.2581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JT31_9PHAE1.120e-168100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G8_ECTSI8.760e-12476.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV00_ECTSI1.900e-7370.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13181contigEcto-sp13_S_contig13181:2485..3628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13181.2581.1mRNA_Ecto-sp13_S_contig13181.2581.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13181 2485..3628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13181.2581.1 ID=prot_Ecto-sp13_S_contig13181.2581.1|Name=mRNA_Ecto-sp13_S_contig13181.2581.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp
MDDRNKAVLATIEDSIDVFFAKREGGTEAWKNGVSAREVQGLVSLGASIP
DPFAGFKLNPIPEADSGCFNLPEDIDKLASRCLEGAATSDGGGVGVPVVN
EGKGACFWIALASGALNTRCSTGGAALALRTGAMRMALLKCEEFLSADGY
LAEYRSGDLFDTKEHDMVMKLAGRVWPMNMSADVARLYYLCAIRSNCGPF
KYSQQAVLPWAAEVLGLKVRVFHPAASVSLVGGKWNKKY
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