prot_Ecto-sp13_S_contig13147.2558.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13147.2558.1
Unique Nameprot_Ecto-sp13_S_contig13147.2558.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13147.2558.1 vs. uniprot
Match: A0A6H5JDT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT9_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.520e-67
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0 
Query:    1 VVARAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKFELHVDHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKASTWAILGSP 116
            VVA APRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKF+LHVDHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTK STWAILGSP
Sbjct:   91 VVATAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKFQLHVDHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKTSTWAILGSP 206
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13147.2558.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 1.150e-62
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0 
Query:    1 VVARAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKFELHVDHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKAST 109
            VVARAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGN+KLKFELHVDHWAFGERELMCQWRVFTRN GVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKAST
Sbjct:  971 VVARAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNIKLKFELHVDHWAFGERELMCQWRVFTRNVGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKAST 1079
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13147.2558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDT9_9PHAE2.520e-6797.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR6_ECTSI1.150e-6298.17Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrola... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13147contigEcto-sp13_S_contig13147:867..2126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13147.2558.1mRNA_Ecto-sp13_S_contig13147.2558.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13147 866..2126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13147.2558.1 ID=prot_Ecto-sp13_S_contig13147.2558.1|Name=mRNA_Ecto-sp13_S_contig13147.2558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
VVARAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKFELHV
DHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPV
VEPKTKASTWAILGSPPPPPPPPPQEKAQATAAH
back to top