prot_Ecto-sp13_S_contig13078.2517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13078.2517.1
Unique Nameprot_Ecto-sp13_S_contig13078.2517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13078.2517.1 vs. uniprot
Match: D7FW05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW05_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.150e-14
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:   24 WGLWCLQMKVPAATTTHHDDRARQR-IAGAWSAPATWSASAANM 66
            WG WCLQ+K PAA TT HDDRARQR IAGAWSAPA  SASAA+M
Sbjct:    3 WGAWCLQVKAPAAATTEHDDRARQRRIAGAWSAPAGSSASAASM 46
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13078.2517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW05_ECTSI1.150e-1479.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13078contigEcto-sp13_S_contig13078:3615..4119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13078.2517.1mRNA_Ecto-sp13_S_contig13078.2517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13078 3615..4141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13078.2517.1 ID=prot_Ecto-sp13_S_contig13078.2517.1|Name=mRNA_Ecto-sp13_S_contig13078.2517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
MLLSTTAYHANTLNNYLSRCGLHWGLWCLQMKVPAATTTHHDDRARQRIA
GAWSAPATWSASAANMMSC*
back to top