prot_Ecto-sp13_S_contig12989.2453.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12989.2453.1
Unique Nameprot_Ecto-sp13_S_contig12989.2453.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.660e-54
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSSPAGRRINGRILQRRRMDSIAIASAKIMIASLQFSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            +EDGE AALIGNSFIDVLGLVTSKTAAMDFDAG+LSVSVPEGAINPTSVQ             AGR INGRILQRRRMDSIA ASA I IASLQFSANGRPSSQVDAGVSSITITTSS GQDIALSAP+RMTMRA
Sbjct: 1127 LEDGEDAALIGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAINPTSVQRXXXXXXXXXXXXAGRIINGRILQRRRMDSIATASATITIASLQFSANGRPSSQVDAGVSSITITTSSGGQDIALSAPVRMTMRA 1261          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: A0A6H5JM67_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM67_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 9.930e-15
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSSPAGRRING--RILQR------RRMDSIAIASAKIMIASLQ-FSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            MEDGEG   I + ++    LVTS T ++ F  G  SVS  +G I   S   TRRRM       +  +  G  R  +R      RR++S+++ S   ++ + Q F+AN RPS+ V+ GV+ I ++++S+G+DIAL+ P+++TMRA
Sbjct:  369 MEDGEGVMTIESEYVQASCLVTSSTGSLSFATGTSSVSFEDGVIASPSSPSTRRRMTPEIDGGSKCKSGGCARSTRRMPKSSSRRLNSVSLTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRA 512          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7G398_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G398_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.050e-14
Identity = 56/144 (38.89%), Postives = 86/144 (59.72%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSS----PAGR--RINGRILQR--RRMDSIAIASAKIMIASLQ-FSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            MEDGEG   I + ++    LVTS T ++ FD G  SVS  +G I   S   TRRRM           +GR  R   R+ +   RR++S++  S   ++ + Q F+AN RPS+ V+ GV+ I ++++S+G+DIAL+ P+++TMRA
Sbjct: 1054 MEDGEGVMTIESEYVQASCLVTSSTGSLSFDTGTSSVSFEDGVIASPSSPSTRRRMTPEIDGGLKCKSGRCARSTRRMPKSSSRRLNSVSSTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRA 1197          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.620e-14
Identity = 54/145 (37.24%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSSPAGRRINGRILQR---------RRMDSIAIASAKIMIASLQ-FSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            MEDGEG   I + ++    LVTS T ++ FD G  SVS  +G +   S   TRRRM T       +  +GR  +          RR++S++  S   ++ + Q F+AN RPS+ V+ GV+ I ++++S+G+DIAL+ P+++TMRA
Sbjct:  601 MEDGEGVMTIESEYVQASCLVTSSTGSLSFDTGTSSVSFEDGVLASPSSPSTRRRM-THEIDGGLKCKSGRCARSTRHMPKSSSRRLNSVSSTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRA 744          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7FLQ3_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ3_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 4.030e-13
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSSPAGRRING--------RILQRRRMDSIAIASAKIMIASLQ-FSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            MEDGE    I +  +    L+TS+T ++ FDAG  SVS   G I   S   TRRRM       +  +  G        R    RR+ +++ AS   ++ + Q F+A  RPS+ V+ GV+ I ++++ +G+DIAL+ P+++TMRA
Sbjct:   24 MEDGEDVMTIESDHVQASCLITSRTGSLSFDAGTSSVSFENGVIGSPSPPSTRRRMTPEMDEGSKCKAGGCGSSTNRRRRPSSRRLSTVSPASTSTVLVTNQLFNAVSRPSALVNGGVTQIRVSSTDDGEDIALAGPVQLTMRA 167          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7G3A1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 7.840e-13
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQGTRRRMATSSSSPAGRRING--------RILQRRRMDSIAIASAKIMIASLQ-FSANGRPSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA 135
            MEDGE    I +  +    L+TS+T ++ FDAG  SVS   G I   S   TRRRM       +  +  G        R    RR+ +++ AS   ++ + Q F+A  RPS+ V+ G++ I ++++ +G+DIAL+ P+++TMRA
Sbjct:  646 MEDGEDVMTIESDHVQASCLITSRTGSLSFDAGTSSVSFENGVIGSPSPPSTRRRMTPEMDEGSKCKAGGCGSSTNRRRRPSSRRLSTVSPASTSTVLVTNQLFNAVSRPSALVNGGITQIRVSSTDDGEDIALAGPVQLTMRA 789          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.150e-8
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGA-LSVSVP 40
            +EDGE AALIGNSFIDVLGLVTSKT+AMDFDAG  +++S P
Sbjct:  242 LEDGEDAALIGNSFIDVLGLVTSKTSAMDFDAGEDITLSAP 282          
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Match: D7FLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ0_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.400e-7
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVS 38
            +EDGE AALIGNSFIDVLGLVTSKTAAMD  AG   +S
Sbjct:  185 LEDGEDAALIGNSFIDVLGLVTSKTAAMDLAAGYCPLS 222          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12989.2453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G4X3_ECTSI2.660e-5483.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM67_9PHAE9.930e-1537.50GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G398_ECTSI1.050e-1438.89GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3A0_ECTSI2.620e-1437.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLQ3_ECTSI4.030e-1335.42GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3A1_ECTSI7.840e-1334.72GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JLT2_9PHAE1.150e-878.05GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLQ0_ECTSI2.400e-778.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12989contigEcto-sp13_S_contig12989:3928..4863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12989.2453.1mRNA_Ecto-sp13_S_contig12989.2453.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12989 3928..4863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12989.2453.1 ID=prot_Ecto-sp13_S_contig12989.2453.1|Name=mRNA_Ecto-sp13_S_contig12989.2453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MEDGEGAALIGNSFIDVLGLVTSKTAAMDFDAGALSVSVPEGAINPTSVQ
GTRRRMATSSSSPAGRRINGRILQRRRMDSIAIASAKIMIASLQFSANGR
PSSQVDAGVSSITITTSSEGQDIALSAPIRMTMRA
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