prot_Ecto-sp13_S_contig12978.2443.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12978.2443.1
Unique Nameprot_Ecto-sp13_S_contig12978.2443.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length141
Homology
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: D7FMG0_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG0_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 7.570e-59
Identity = 94/134 (70.15%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 MSHPILDRAFEKHVQDYLCLESYDFVKEVAQYVSDTDKESVEQLFVHFRRIVDVYILAGSELEINIETAMRQKVLEIGDREAFVKAATERRRDVFNPPKAEVLKILDDNLLPSFLASQHFLDASKNWQEALAAG 134
            MS+PILD+AFEKHVQDYLC ESYDFVKEV +YV+  + ES  +LFVHFRRIVD YI++GSELE+NIE AMR KVLEIG+R  FV+A  ER+R +FNPPK E  KILDDNLL SFL S++FLDA   WQE  AAG
Sbjct:   43 MSNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAENESAAELFVHFRRIVDKYIVSGSELELNIENAMRNKVLEIGERMIFVEAGMERQRGIFNPPKEEAHKILDDNLLQSFLTSRNFLDACLRWQEVQAAG 176          
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: A0A6H5JPT6_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.700e-47
Identity = 91/145 (62.76%), Postives = 99/145 (68.28%), Query Frame = 0
Query:    1 MSHPILDRAFEKHVQDYLCLESYDFVKEVAQYVSDTDKESVEQLFVHFRRIVDVYILAGSELEINIETAMRQKVLEIGD-------------------REAFVKAATERRRDVFNPPKAEVLKILDDNLLPSFLASQHFLDASKN 126
            MSHPILDRAFEKHVQDYLCLESYDFVK                       IVD+YILAGSE+EINIETAMR+KVLE+ +                   +EAFVKA TERRRD+FNPPKAEVLKILDDNL+ SFLASQ FLDASKN
Sbjct:   43 MSHPILDRAFEKHVQDYLCLESYDFVK-----------------------IVDMYILAGSEMEINIETAMRKKVLEVCNMRSHVQFLAPANAAAVRVGKEAFVKAVTERRRDIFNPPKAEVLKILDDNLVQSFLASQQFLDASKN 164          
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: A0A6H5K6J1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J1_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.390e-42
Identity = 80/158 (50.63%), Postives = 100/158 (63.29%), Query Frame = 0
Query:    1 MSHPILDRAFEKHVQDYLCLESYDFVKEVAQYVSDTDKESVEQLFVHFRRIVDVYILAGSELEINIETAMRQKVLE------------------------IGDREAFVKAATERRRDVFNPPKAEVLKILDDNLLPSFLASQHFLDASKNWQEALAAG 134
            MS+P+LD+AFEKH QDYLC ESYDF++EV  YV+  ++   E  F HF  IV+VYI AGS+LEINI TAMR  VLE                        IGDR  F++A  ER+RDVFNPP+ E+ K++D+NL+ SF   Q FLDA K W+E   AG
Sbjct:   42 MSNPVLDQAFEKHAQDYLCSESYDFIQEVGCYVALAEQNPAEDRFAHFTNIVNVYISAGSKLEINIGTAMRTGVLERKARDNSTLFHDMCTSPNRSWFAKIGDRVRFLEATFERQRDVFNPPRMEISKMIDENLVHSFWTRQLFLDACKKWEEQQGAG 199          
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: A0A6H5LMC0_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMC0_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.700e-39
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0
Query:   28 EVAQYVSDTDKESVEQLFVHFRRIVDVYILAGSELEINIETAMRQKVLEIGDREAFVKAATERRRDVFNPPKAEVLKILDDNLLPSFLASQHFLDASKNWQEALAAG 134
            +V +YV+  +KES  +LFVHFRRIVD YI++GSELE+NIE+AMR KVLE+G+R  FV+A  ER+R +FNP K E  KILDDNLL SFL S+ FLDA   WQEA AAG
Sbjct:    3 QVERYVAHAEKESAAELFVHFRRIVDKYIVSGSELELNIESAMRNKVLEVGERVIFVEAGMERQRGIFNPSKEEAHKILDDNLLQSFLTSRKFLDACLRWQEAQAAG 109          
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: A0A836CE15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE15_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.660e-8
Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 0
Query:    4 PILDRAFEKHVQDYLCLESYDFVKEVAQYVSDTDKESVEQLFVHFRRIVDVYILAGSELEINIETAMRQKVLEIGDREAFVKAATERRRDVFNPPKAEVLKILDDNLLPSFLASQHFLDA 123
            P L+ AF  HV+  LC ESY F+ E   Y S   ++  EQ +  F ++V   I   S  EI          ++  D   F+    E RR +F    AEV ++LD NL+ SF+ ++ ++ A
Sbjct:  292 PALNVAFAAHVERCLCYESYKFLAESMAYTSSAFEDPEEQ-YAAFEKVVATCIAVNSTFEI----------MKYRDETIFILLEPEARRTIFKEAAAEVARMLDQNLIASFVGTKQYIAA 400          
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Match: A0A6H5KZ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ93_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.900e-7
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
Query:    1 MSHPILDRAFEKHVQDYLCLESYDFVKEV 29
            MS+P+LD AFEKHVQDYLC ESYDFVKEV
Sbjct:   43 MSNPMLDPAFEKHVQDYLCSESYDFVKEV 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12978.2443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FMG0_ECTSI7.570e-5970.15RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT6_9PHAE3.700e-4762.76RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6J1_9PHAE1.390e-4250.63RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LMC0_9PHAE1.700e-3964.49RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CE15_9STRA1.660e-832.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KZ93_9PHAE1.900e-786.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPFAMPF00615RGScoord: 3..122
e-value: 4.1E-9
score: 36.7
IPR016137RGS domainPROSITEPS50132RGScoord: 1..124
score: 12.114
NoneNo IPR availableGENE3D1.20.58.1850coord: 1..132
e-value: 1.5E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR10845REGULATOR OF G PROTEIN SIGNALINGcoord: 8..128
NoneNo IPR availablePANTHERPTHR10845:SF192REGULATOR OF G PROTEIN SIGNALING-RELATEDcoord: 8..128
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 2..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12978contigEcto-sp13_S_contig12978:1258..3596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12978.2443.1mRNA_Ecto-sp13_S_contig12978.2443.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12978 1242..4244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12978.2443.1 ID=prot_Ecto-sp13_S_contig12978.2443.1|Name=mRNA_Ecto-sp13_S_contig12978.2443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
MSHPILDRAFEKHVQDYLCLESYDFVKEVAQYVSDTDKESVEQLFVHFRR
IVDVYILAGSELEINIETAMRQKVLEIGDREAFVKAATERRRDVFNPPKA
EVLKILDDNLLPSFLASQHFLDASKNWQEALAAGNQPHGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf