prot_Ecto-sp13_S_contig12839.2344.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12839.2344.1
Unique Nameprot_Ecto-sp13_S_contig12839.2344.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length432
Homology
BLAST of mRNA_Ecto-sp13_S_contig12839.2344.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE)

HSP 1 Score: 620 bits (1598), Expect = 1.110e-211
Identity = 357/432 (82.64%), Postives = 372/432 (86.11%), Query Frame = 0
Query:    1 MSLGAIASRAIALRQQFLRCSGNAAAXXXXXXXRGAGEPQVAVKIRPPRVVVRXXAALPSPSSSS-PVEAVARNAAAPQPTAKPYNPPAKAGGARWLGSPSSRRGTAAGSPSVVELVERGGASFVAFADGRARGAFADRTIVSLGAPFFYRPLRGSRCGGSGGGSGG-RGISYCGSGGREGVATAVVRPGCSDDDKEEREE-DREIECIRADGTVLRLTRRSLDRLGSFGERSGGCNSPAGDDCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAGRAAAAAEAERNRRFVDLQLLAAKRSVAPPSLLCYHRRGPDPRKPHDGSPSGAAGSRRGGHRSGDEANASPGLRRRAVGVGGEENNDGQHKENSRPRRPGSRVHVVEGGFGVSRWGGGDGGRQRNSLVAGLLEANRKVLMGEDMSRKCARGKL 429
            MSLGAI SRAIALRQQFLRCSG  AA       RGAG+ +  VKIRPPRVVV+  AAL SPSSSS PVEAVA NAAAP+PT KPY PP +AGGARWLGSPSSR GTAAGSPSVVELVERGGASFVAFADGRARGAFADRTIVSLGAP FYRPLRGSRCGG        RGISY GSGG +GVATAVVRPGCSD D+EE+EE DREIECIRADGTVLRLTR SLDR GSFG RSGG NSPA  +CGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAG    AAEAERNRRFVDLQLLAAKRSVAPP LLCYHR GPD R+P+DGSPSGAAGSRRGG RSGDEANASPGL RRAVGVGGEENND Q KENSRPRRP +RV V+EG  GVS+WGGGDGGRQRNSLVAGLLEANRKVLMGED+SRK    KL
Sbjct:  603 MSLGAITSRAIALRQQFLRCSG-IAATAAAAGIRGAGDHRDIVKIRPPRVVVQPPAALSSPSSSSSPVEAVAGNAAAPRPTTKPYAPP-EAGGARWLGSPSSRGGTAAGSPSVVELVERGGASFVAFADGRARGAFADRTIVSLGAPVFYRPLRGSRCGGXXXXXXXXRGISYYGSGGPKGVATAVVRPGCSDVDEEEKEEEDREIECIRADGTVLRLTRHSLDRRGSFGGRSGGGNSPASGNCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAGXXXXAAEAERNRRFVDLQLLAAKRSVAPPPLLCYHRGGPDQRQPYDGSPSGAAGSRRGGRRSGDEANASPGLWRRAVGVGGEENNDDQDKENSRPRRPSNRVDVLEGSSGVSKWGGGDGGRQRNSLVAGLLEANRKVLMGEDLSRKFPPEKL 1032          
BLAST of mRNA_Ecto-sp13_S_contig12839.2344.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI)

HSP 1 Score: 543 bits (1400), Expect = 1.430e-183
Identity = 321/430 (74.65%), Postives = 338/430 (78.60%), Query Frame = 0
Query:    1 MSLGAIASRAIALRQQFLRCSGN-AAAXXXXXXXRGAGEPQVAVKIRPPRVVVRXXAALPSPSSSS-PVEAVARNAAAPQPTAKPYNPPAKAGGARWLGSPSSRRGTAAGSPSVVELVERGGASFVAFADGRARGAFADRTIVSLGAPFFYRPLRGSRCGGSGGGSGGRGISYCGSGGREGVATAVVRPGCSDDDKEEREEDREIECIRADGTVLRLTRRSLDRLGSFGERSGGCNSPAGDDCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAGRAAAAAEAERNRRFVDLQLLAAKRSVAPPSLLCYHRRGPDPRKPHDGSPSGAAGSRRGGHRSGDEANASPGLRRRAVGVGGEENNDGQHKENSRPRRPGSRVHVVEGGFGVSRWGGGDGGRQRNSLVAGLLEANRKVLMGEDMSRKCARGK 428
            MSLG IASRAIALRQQFL+CSGN AAA       RG GEPQV VKIRP  VVV+  +AL SPSSSS PVEAV RNAAAP+PT KPY PP + GGARWLGS SSR   AAGSPSVVE VERGGASFVAFADGRARG FADRTIV LGAPFFYRPLRGSRCG   GG                                     RE+ECIRADGTVLRLTRRSLDR GSFG RSGG N PAG DCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAA     AAEAERNRRFVDLQLLAAKRSV PP LLCYHR G DPR+P+DG+PSGAAGSRRGG RSGDEA+ASPGLRRRAVG  GEEN+DGQ+KEN+RPRRP +RV V+E G GVSRWGGGDGGRQRNSLVAGLLEANRKVLMGE MSRK A+G+
Sbjct:  446 MSLGNIASRAIALRQQFLQCSGNPAAAAAAAAGRRGPGEPQVTVKIRPSLVVVQPPSALSSPSSSSSPVEAVVRNAAAPRPTNKPYAPPEE-GGARWLGSSSSRGRMAAGSPSVVESVERGGASFVAFADGRARGTFADRTIVCLGAPFFYRPLRGSRCGV--GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVECIRADGTVLRLTRRSLDRRGSFGGRSGGGNIPAGGDCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAXXXXXAAEAERNRRFVDLQLLAAKRSVPPPPLLCYHRGGLDPREPYDGTPSGAAGSRRGGRRSGDEASASPGLRRRAVGACGEENDDGQYKENNRPRRPSNRVDVLEEGSGVSRWGGGDGGRQRNSLVAGLLEANRKVLMGEHMSRKFAQGE 872          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12839.2344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVD6_9PHAE1.110e-21182.64DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LL70_ECTSI1.430e-18374.65DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12839contigEcto-sp13_S_contig12839:3189..4484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12839.2344.1mRNA_Ecto-sp13_S_contig12839.2344.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12839 3154..4811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12839.2344.1 ID=prot_Ecto-sp13_S_contig12839.2344.1|Name=mRNA_Ecto-sp13_S_contig12839.2344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=432bp
MSLGAIASRAIALRQQFLRCSGNAAAAAAAAGGRGAGEPQVAVKIRPPRV
VVRPPAALPSPSSSSPVEAVARNAAAPQPTAKPYNPPAKAGGARWLGSPS
SRRGTAAGSPSVVELVERGGASFVAFADGRARGAFADRTIVSLGAPFFYR
PLRGSRCGGSGGGSGGRGISYCGSGGREGVATAVVRPGCSDDDKEEREED
REIECIRADGTVLRLTRRSLDRLGSFGERSGGCNSPAGDDCGVGALRPYV
VAVLRFADWAATHPADRRAAAGREAAGRAAAAAEAERNRRFVDLQLLAAK
RSVAPPSLLCYHRRGPDPRKPHDGSPSGAAGSRRGGHRSGDEANASPGLR
RRAVGVGGEENNDGQHKENSRPRRPGSRVHVVEGGFGVSRWGGGDGGRQR
NSLVAGLLEANRKVLMGEDMSRKCARGKLLW*
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