prot_Ecto-sp13_S_contig12411.2004.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12411.2004.1
Unique Nameprot_Ecto-sp13_S_contig12411.2004.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length94
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12411.2004.1 vs. uniprot
Match: D7G4K6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K6_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 3.950e-39
Identity = 78/87 (89.66%), Postives = 79/87 (90.80%), Query Frame = 0 
Query:    7 GVVDVKEIAGALKENYSTAQISAGMGDAVTEGELANLLSSLSPDTSGDATGHASTSGTANKSINPAVVGSSPEADFDDFVRLFRGVF 93
            GVVDVKEIAGALKENYSTAQISAGMGDAVTEGELA LLSSLSP TSGDATGH STSGT N S NPA VGSSPEA+FDDFVRLF GVF
Sbjct: 1483 GVVDVKEIAGALKENYSTAQISAGMGDAVTEGELAALLSSLSPATSGDATGHTSTSGTTNNSTNPAGVGSSPEANFDDFVRLFHGVF 1569
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12411.2004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4K6_ECTSI3.950e-3989.66EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12411contigEcto-sp13_S_contig12411:2572..3494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12411.2004.1mRNA_Ecto-sp13_S_contig12411.2004.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12411 2572..3494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12411.2004.1 ID=prot_Ecto-sp13_S_contig12411.2004.1|Name=mRNA_Ecto-sp13_S_contig12411.2004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
CRHAFEGVVDVKEIAGALKENYSTAQISAGMGDAVTEGELANLLSSLSPD
TSGDATGHASTSGTANKSINPAVVGSSPEADFDDFVRLFRGVF*
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