prot_Ecto-sp13_S_contig12100.1790.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12100.1790.1
Unique Nameprot_Ecto-sp13_S_contig12100.1790.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.610e-45
Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 0
Query:    1 VVVQIGLGELLCDSLEDAPDSTFLRFNVSSTEAVIAERTSFSSVDGNVFPDGETRKIWTGEVVDPEPPAGSAPRTVSMTWTEPCSVE 87
            VVV IGLGELLCDSLEDA DST LRFN+SSTE VIAERTS+SS+DGN+FPDGETRK W GEVVDPEPPAGSAPRTVSMTWT PC VE
Sbjct:   79 VVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPPAGSAPRTVSMTWTNPCGVE 165          
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.910e-34
Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    1 VVVQIGLGELLCDSLEDAPDSTFLRFNVSSTEAVIAERTSFSSVDGNVFPDGETRKIWTGEVVDPEPPAGSAPRTVSMTWTEPCSVE 87
            V+  I LG+LLCDSLEDA DS+ LRF +SSTE VIAERTS+SS+DGNV PDG  RK W GEVVDPEP   S PRTVSMTWT+PC +E
Sbjct:  167 VMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIE 253          
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.110e-18
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    1 VVVQIGLGELLCDSLEDAPDSTFLRFNVSSTEAVIAERTSFSSVDGNVFPDGETRKIWTGEVVDPEPPAGSAPRTVSMTWTEPCS 85
            VV  I LG+LLCDSLEDA DS+ LRF +SSTE VIAERTS+SS+DG++ PDG TRK +  ++V     + ++  + S+  + PCS
Sbjct:   81 VVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDGSILPDGNTRKTFLLKLV-----SRNSDGSTSIVTSVPCS 160          
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.360e-16
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    2 VVQIGLGELLCDSLEDAPDSTFLRFNVSSTEAVIAERTSFSSVDGNVFPDGETRKIWTGEVVDPEPPAGSAPRTVSMTWTEPCS 85
            V  I LGELLCDSLEDA DS+ LRF +SSTE VIAERTS+SS+DG+V  DG TR  +  ++V     + +A  + S+  + PCS
Sbjct:   10 VGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRMSFLLKLV-----SRNADGSTSIVTSVPCS 88          
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.340e-15
Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   30 STEAVIAERTSFSSVDGNVFPDGETRK-------------IWTGEVVDPEPPAGSAPRTVSMTWTEPCSVE 87
            +++ VIAERTS+SS+DG+V  DG TRK              W GEVVDPEP A S PRTVSMTWT+PC  E
Sbjct:    5 TSQTVIAERTSYSSIDGSVLSDGITRKDELTGDGSHGLFQTWLGEVVDPEPSANSIPRTVSMTWTDPCDTE 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12100.1790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLU0_ECTSI1.610e-4586.21PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JF50_9PHAE3.910e-3471.26LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LMP1_ECTSI1.110e-1852.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV1_ECTSI2.360e-1653.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRC1_9PHAE2.340e-1556.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12100contigEcto-sp13_S_contig12100:220..1738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12100.1790.1mRNA_Ecto-sp13_S_contig12100.1790.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12100 220..1738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12100.1790.1 ID=prot_Ecto-sp13_S_contig12100.1790.1|Name=mRNA_Ecto-sp13_S_contig12100.1790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
VVVQIGLGELLCDSLEDAPDSTFLRFNVSSTEAVIAERTSFSSVDGNVFP
DGETRKIWTGEVVDPEPPAGSAPRTVSMTWTEPCSVE
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