prot_Ecto-sp13_S_contig12079.1765.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12079.1765.1
Unique Nameprot_Ecto-sp13_S_contig12079.1765.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12079.1765.1 vs. uniprot
Match: D8LMC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC8_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.170e-37
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0 
Query:    1 MVTSCADEITTCAQDADCLSCMMAPSVNDGSESCEDMVTSDTPCSGVENMLCCLYGDTETCRDNAPFLGFA 71
            MVTSCADEI TCAQDADCLSCMMAPSVNDGSESCE+MVT+DTPCSGVENMLCCLYGDTETCRDNAPFL FA
Sbjct:  285 MVTSCADEIATCAQDADCLSCMMAPSVNDGSESCENMVTADTPCSGVENMLCCLYGDTETCRDNAPFLEFA 355
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BLAST of mRNA_Ecto-sp13_S_contig12079.1765.1 vs. uniprot
Match: A0A6H5JE55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE55_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.160e-34
Identity = 64/73 (87.67%), Postives = 65/73 (89.04%), Query Frame = 0 
Query:  141 ITHTDCSGLTDYFCCVIDGMGSCRNNHLLLDYVNCGIGWSSCTLTDLCDYTPEVADDDVSDGYTPELVDDYVY 213
            +THTDCSGLTDYFCCVI GMGSCRNNHLLLDYVNCGIGWSSCTLTDLCDYTPEVADDDVSD       DDYVY
Sbjct:    1 MTHTDCSGLTDYFCCVIGGMGSCRNNHLLLDYVNCGIGWSSCTLTDLCDYTPEVADDDVSDDXXXXXDDDYVY 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12079.1765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMC8_ECTSI4.170e-3794.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JE55_9PHAE1.160e-3487.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12079contigEcto-sp13_S_contig12079:28..3090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12079.1765.1mRNA_Ecto-sp13_S_contig12079.1765.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12079 25..5189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12079.1765.1 ID=prot_Ecto-sp13_S_contig12079.1765.1|Name=mRNA_Ecto-sp13_S_contig12079.1765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MVTSCADEITTCAQDADCLSCMMAPSVNDGSESCEDMVTSDTPCSGVENM
LCCLYGDTETCRDNAPFLGFASCAAHTVLPDDQCTLTELCSSSSSRTTSE
SWDSDSDDDYDPCPVELVACQDDESCRACLDIASTDESCDITHTDCSGLT
DYFCCVIDGMGSCRNNHLLLDYVNCGIGWSSCTLTDLCDYTPEVADDDVS
DGYTPELVDDYVYTRIISSSNSFKAVTLIAFR*
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