prot_Ecto-sp13_S_contig12030.1734.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12030.1734.1
Unique Nameprot_Ecto-sp13_S_contig12030.1734.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12030.1734.1 vs. uniprot
Match: D8LD73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD73_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.060e-72
Identity = 124/146 (84.93%), Postives = 128/146 (87.67%), Query Frame = 0 
Query:    1 MLEAEARARRYVRDKLAGDGAGAAEFVAPPELPKAARGQAFGGERKPAPPGRTGEGLGPAQTTPLAKIESQRPAAAA----GDVRDEGEAGATGAEGSDNPFVVGLDTRYDESPVGPIGEADDDPFEAPFYPFDDDGPPLNGRAFQ 142
            MLEAEARARRYVRDKLAGDGAGAAEFVAPPE PKAARG+AFGGERKPAP  RTGEGLGP QTTP AK+E Q+PAAA     GDVRD+GEAG  GAEG DNPFVVG DTRYDE PVGPIGEADDDPFEAPFYPFD DGPPLNGRA Q
Sbjct:  540 MLEAEARARRYVRDKLAGDGAGAAEFVAPPESPKAARGRAFGGERKPAPSARTGEGLGPGQTTPPAKVERQQPAAAXXXXXGDVRDKGEAGGAGAEGGDNPFVVGADTRYDEGPVGPIGEADDDPFEAPFYPFDADGPPLNGRALQ 685
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BLAST of mRNA_Ecto-sp13_S_contig12030.1734.1 vs. uniprot
Match: A0A6H5K5Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z2_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 4.250e-70
Identity = 119/148 (80.41%), Postives = 123/148 (83.11%), Query Frame = 0 
Query:    1 MLEAEARARRYVRDKLAGDGAGAAEFVAPPELPKA--ARGQAFGGERKPAPPGRTGEGLGPAQTTPLAKIESQ----RPAAAAGDVRDEGEAGATGAEGSDNPFVVGLDTRYDESPVGPIGEADDDPFEAPFYPFDDDGPPLNGRAFQ 142
            M EAEARARRYVRDKLAGDGAG AEFVAPPE PKA  ARG+AFGGERKPAP  RTGEG GP QTTP AK+ESQ           D+ DEGEAG  GAEGSDNPFVVG DTRYDE+PVGPIGEADDDPFEAPFYPFDDDGPPLNGRAFQ
Sbjct:  103 MQEAEARARRYVRDKLAGDGAGVAEFVAPPESPKAKAARGRAFGGERKPAPSARTGEGSGPGQTTPPAKVESQPXXXXXXXXXXDMCDEGEAGGGGAEGSDNPFVVGGDTRYDEAPVGPIGEADDDPFEAPFYPFDDDGPPLNGRAFQ 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12030.1734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD73_ECTSI1.060e-7284.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5Z2_9PHAE4.250e-7080.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12030contigEcto-sp13_S_contig12030:2289..3328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12030.1734.1mRNA_Ecto-sp13_S_contig12030.1734.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12030 2280..3328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12030.1734.1 ID=prot_Ecto-sp13_S_contig12030.1734.1|Name=mRNA_Ecto-sp13_S_contig12030.1734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MLEAEARARRYVRDKLAGDGAGAAEFVAPPELPKAARGQAFGGERKPAPP
GRTGEGLGPAQTTPLAKIESQRPAAAAGDVRDEGEAGATGAEGSDNPFVV
GLDTRYDESPVGPIGEADDDPFEAPFYPFDDDGPPLNGRAFQ*
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