prot_Ecto-sp13_S_contig12017.1725.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12017.1725.1
Unique Nameprot_Ecto-sp13_S_contig12017.1725.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12017.1725.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.450e-57
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLAAPAAAVEYMVTTCADLADVDDTQITGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVNQVGTGT 103
            MKPVSLTFIASLLA PAAAVEYMVTTCADLADVDDTQ+TGLTIDA+TFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVV+Q   GT
Sbjct:    1 MKPVSLTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGT 103
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BLAST of mRNA_Ecto-sp13_S_contig12017.1725.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 3.430e-49
Identity = 90/102 (88.24%), Postives = 93/102 (91.18%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLAAPAAAVEYMVTTCADLADVDDTQITGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVNQVGTG 102
            MKP SLT IA LLAAPAAAVEY V TCADLADVDDTQ+TGLTID STFACDEYTRF VRNSMTLKATV+AVEFGNFSLKVLGELTVEPDVTFNGVV+QV  G
Sbjct:    1 MKPCSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNG 102
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BLAST of mRNA_Ecto-sp13_S_contig12017.1725.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.910e-48
Identity = 90/102 (88.24%), Postives = 93/102 (91.18%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLAAPAAAVEYMVTTCADLADVDDTQITGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVNQVGTG 102
            MK VSLT IASLLAAPAAAVEY V TCADLADVDDTQ+T LTIDASTFACDEYTRFRVRN+MTLKATV AVEFGNFSLKVLGELTVEPDV FNGVV+QV  G
Sbjct:    1 MKTVSLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNG 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12017.1725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQG2_ECTSI1.450e-5793.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ44_ECTSI3.430e-4988.24Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI1.910e-4888.24Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.817

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12017contigEcto-sp13_S_contig12017:1532..1861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12017.1725.1mRNA_Ecto-sp13_S_contig12017.1725.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12017 1532..1861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12017.1725.1 ID=prot_Ecto-sp13_S_contig12017.1725.1|Name=mRNA_Ecto-sp13_S_contig12017.1725.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
MKPVSLTFIASLLAAPAAAVEYMVTTCADLADVDDTQITGLTIDASTFAC
DEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVNQVG
TGTAVVSVD*
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