prot_Ecto-sp13_S_contig12012.1723.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12012.1723.1
Unique Nameprot_Ecto-sp13_S_contig12012.1723.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12012.1723.1 vs. uniprot
Match: A0A6H5KAA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA0_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 5.390e-48
Identity = 101/143 (70.63%), Postives = 114/143 (79.72%), Query Frame = 0 
Query:   58 MRPYPGAEDNTCAGDPATPKSDNSGKDEHDSPQAAVASTPSPQVTNESVGTSLGGSGGDHSPNLPLEPPQSGIELLGNKVSTELDGDSMSRDSSTGVVPATSRSLLSTPPAPLGHRAAIASASSPQAIHDSVGTSVGGSGRFP 200
            MRPYP A ++T AGDP TP+SD+SGKDE +  Q A+AS PSPQVT++SVGTS+GGSGGDHSP LPLEP QSG+ELLGN+V TELDG S S  SSTG VP  S +LLST P PLGH A IA+AS PQA  DSVG SVGGSGR P
Sbjct:    1 MRPYPVAGNDTSAGDPVTPESDDSGKDERNDHQPAIASAPSPQVTDDSVGTSVGGSGGDHSPKLPLEPSQSGVELLGNEVRTELDGGSTSHGSSTGDVPVASPALLSTSP-PLGHGAGIAAASPPQATDDSVGISVGGSGRVP 142
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BLAST of mRNA_Ecto-sp13_S_contig12012.1723.1 vs. uniprot
Match: D7FN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN11_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.450e-35
Identity = 96/198 (48.48%), Postives = 108/198 (54.55%), Query Frame = 0 
Query:   47 GDAHDITKPLPMRPYPGAEDNTCAGDPATPKSDNSGKDEHDSPQAAVASTPSPQVTNESV-----GTSLGGSGGDHSPNLPLEPPQSGIELLGNKVSTELDGDSMSRDSSTGV---------------------------------------VPATSRSLLSTPPAPLGHRAAIASASSPQAIHDSVGTSVGGSGRFP 200
            GD   I KPLPMRPYP A D+T AGDP TP+SD SGKDE +  Q A+AS PSPQVT++S      GTS+GGSG  H+P LP      G+E+LGN+  +ELD                                                   VP TS SLLST PAP GHRAAIA ASSPQA  DSVGTSVGGSGR P
Sbjct:  137 GDTDGIAKPLPMRPYPVAGDDTSAGDPVTPESDYSGKDERNDHQPAIASAPSPQVTDDSAADDPTGTSVGGSGRGHTPKLPST---GGMEMLGNEFPSELDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVTSLSLLSTSPAPPGHRAAIAVASSPQATRDSVGTSVGGSGRVP 331
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12012.1723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAA0_9PHAE5.390e-4870.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN11_ECTSI2.450e-3548.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12012contigEcto-sp13_S_contig12012:4047..5023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12012.1723.1mRNA_Ecto-sp13_S_contig12012.1723.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12012 4047..5215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12012.1723.1 ID=prot_Ecto-sp13_S_contig12012.1723.1|Name=mRNA_Ecto-sp13_S_contig12012.1723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MGDNIGGAGGEQDIDTILPGGSEEEEEEATQQQSLEAVQRQQGDNMGDAH
DITKPLPMRPYPGAEDNTCAGDPATPKSDNSGKDEHDSPQAAVASTPSPQ
VTNESVGTSLGGSGGDHSPNLPLEPPQSGIELLGNKVSTELDGDSMSRDS
STGVVPATSRSLLSTPPAPLGHRAAIASASSPQAIHDSVGTSVGGSGRFP
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