prot_Ecto-sp13_S_contig1200.1716.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1200.1716.1
Unique Nameprot_Ecto-sp13_S_contig1200.1716.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length654
Homology
BLAST of mRNA_Ecto-sp13_S_contig1200.1716.1 vs. uniprot
Match: D8LI26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI26_ECTSI)

HSP 1 Score: 1130 bits (2924), Expect = 0.000e+0
Identity = 601/653 (92.04%), Postives = 614/653 (94.03%), Query Frame = 0
Query:    1 MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQQHHDHQRCAMAVVYFSREDEASVQDPMCHVLHDDAGEIESALARLHDSLPFVDDVIASPARAASVSQKSEEQAARNEEPAAAVIATLALFHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRHSGGEEVSHGVEAGGNSGPRGHHRTMCLAFSGGGGGAVESEPSDLCTSTLHRLNGILGDAGRRESEAGSSSSSSRCPLVSTVVAAGYPAYVSVRDPGSRKRVTVAAEAVGAILTCLPVSEASLHLVHAGNDIALRGSQFRVVSVSGGDIAEVVPVESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGIISAAEWCKQVVSASTRFEKLAMQSALGVGVLERAGAREGAAALGQAGGAPTGVARNLPADGCLSVTEVKADESISLAHGGRGEQDDRRRGDGGSATAECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHDVGMSSVYVCGSAGEQESSAASFV 653
            MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIV AEVGDSMEQQ    QRCAMA+VYFSREDEAS+QDPM HVL DDAGEIE ALARLHDSLPFVDDVIASPARA +VSQK++ Q ARNEEPAAAV ATLALFHNPGLDARPFVL+PARELGLHGDRLLQEDEIGAYVGESLERSASR+ GGE+VS  VEAGG+SGPRG+HRTMCLAFSGG GGAVESEPSD CTSTLHRLNGILGDAGRRES AGSSSSSSRCPLVSTV AAGYPAY SVRDP SRKRVTVAAEAVGAILTCLP SEASLHLVHAGNDIALRGSQFRV SV GGDIAEVVPVESKQTEAAT VPTLDGGFAGGCGAGAGDSLWQRPRWPCG+ISAAEWCKQVVSASTRFEKLA+QSALGVGVL+RAGAREGAAALGQAGG P GVARNLPA GCLSVTEVKADESISLA  GRGEQDDRRRGDGGSA  ECGVR GDLCDIRAIGVMAAMQAEQDAYSWLRIARLS LIQGATGDREASSATAAAAPVF GCLTAGTRARC PGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSH VGMSSVYVCG AGEQESSAAS V
Sbjct:    1 MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVIAEVGDSMEQQQQ--QRCAMAIVYFSREDEASLQDPMRHVLQDDAGEIEIALARLHDSLPFVDDVIASPARATTVSQKNQNQGARNEEPAAAVTATLALFHNPGLDARPFVLNPARELGLHGDRLLQEDEIGAYVGESLERSASRYGGGEKVSQAVEAGGSSGPRGYHRTMCLAFSGGEGGAVESEPSDPCTSTLHRLNGILGDAGRRESGAGSSSSSSRCPLVSTVAAAGYPAYASVRDPDSRKRVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVWGGDIAEVVPVESKQTEAATGVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKLAIQSALGVGVLQRAGAREGAAALGQAGGTPAGVARNLPAHGCLSVTEVKADESISLARSGRGEQDDRRRGDGGSAGVECGVRPGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSVLIQGATGDREASSATAAAAPVFHGCLTAGTRARCTPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCGVAGEQESSAASSV 651          
BLAST of mRNA_Ecto-sp13_S_contig1200.1716.1 vs. uniprot
Match: A0A6H5KMN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN4_9PHAE)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 474/511 (92.76%), Postives = 484/511 (94.72%), Query Frame = 0
Query:  147 ASVSQKSEEQAARNEEPAAAVI---ATLALFHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRHSGGEEVSHGVEAGGNSGPRGHHRTMCLAFSGGGGGAVESEPSDLCTSTLHRLNGILGDAGRRESEAGSSSSSS-RCPLVSTVVAAGYPAYVSVRDPGSRKRVTVAAEAVGAILTCLPVSEASLHLVHAGNDIALRGSQFRVVSVSGGDIAEVVPVESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGIISAAEWCKQVVSASTRFEKLAMQSALGVGVLERAGAREGAAALGQAGGAPTGVARNLPADGCLSVTEVKADESISLAHGGRGEQDDRRRGDGGSATAECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHDVGMSSVYVCGSAGEQESSAASFV 653
            ASVSQK++EQ A NE+PAA  +   ATLA FHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRH GGEEVSHGVEAGG SG RGHHRTMCLAFSGGGGGAV SEPSDLCTSTLHRLNGILGDAGRR+S AGSSSSSS RCPLVSTV AAGYPAY SVRDPGSR+RVTVAAEAVGAILTCLP SEASLHLVHAGNDIALRGSQFRV SVSGGDIAEVVP+ESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCG+ISAAEWCKQVVSASTRFEK AMQSALG+GVL+RAGAREGAAALGQAGGAP GVARNLPA G LSVTEVK DESISLAHGGRGEQDDRRRGDGG A AECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSH VGMSSVYVCG AGEQESSAASFV
Sbjct:   29 ASVSQKNQEQGAGNEKPAAVTVTVTATLAFFHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRHDGGEEVSHGVEAGGGSGARGHHRTMCLAFSGGGGGAVGSEPSDLCTSTLHRLNGILGDAGRRKSGAGSSSSSSSRCPLVSTVAAAGYPAYASVRDPGSRERVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVSGGDIAEVVPLESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKFAMQSALGIGVLQRAGAREGAAALGQAGGAPAGVARNLPAHGYLSVTEVKTDESISLAHGGRGEQDDRRRGDGGRAAAECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCGGAGEQESSAASFV 539          
BLAST of mRNA_Ecto-sp13_S_contig1200.1716.1 vs. uniprot
Match: A0A6H5KUX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX6_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.370e-70
Identity = 124/146 (84.93%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    1 MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQQHHDHQR------CAMAVVYFSREDEASVQDPMCHVLHDDAGEIESALARLHDSLPFVDDVI 140
            MS TRVMLVRCTLSMLLGAHAFVVPQP CMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQ             CA+AVVYFS+EDEAS+QDPMC VL DDAGEIESALARLHDSLPFVDD++
Sbjct:    1 MSVTRVMLVRCTLSMLLGAHAFVVPQPSCMISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQXXXXXXXXXXXXXCAIAVVYFSKEDEASLQDPMCRVLQDDAGEIESALARLHDSLPFVDDIV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1200.1716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI26_ECTSI0.000e+092.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN4_9PHAE0.000e+092.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUX6_9PHAE1.370e-7084.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..653
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.776

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1200contigEcto-sp13_S_contig1200:337..3928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1200.1716.1mRNA_Ecto-sp13_S_contig1200.1716.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1200 337..3928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1200.1716.1 ID=prot_Ecto-sp13_S_contig1200.1716.1|Name=mRNA_Ecto-sp13_S_contig1200.1716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=654bp
MSATRVMLVRCTLSMLLGAHAFVVPQPPCMISASDPQYRPVGLEKIGKPA
PPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQQHHDHQRCAMAVVYFS
REDEASVQDPMCHVLHDDAGEIESALARLHDSLPFVDDVIASPARAASVS
QKSEEQAARNEEPAAAVIATLALFHNPGLDARPFVLHPARELGLHGDRLL
QEDEIGAYVGESLERSASRHSGGEEVSHGVEAGGNSGPRGHHRTMCLAFS
GGGGGAVESEPSDLCTSTLHRLNGILGDAGRRESEAGSSSSSSRCPLVST
VVAAGYPAYVSVRDPGSRKRVTVAAEAVGAILTCLPVSEASLHLVHAGND
IALRGSQFRVVSVSGGDIAEVVPVESKQTEAATAVPTLDGGFAGGCGAGA
GDSLWQRPRWPCGIISAAEWCKQVVSASTRFEKLAMQSALGVGVLERAGA
REGAAALGQAGGAPTGVARNLPADGCLSVTEVKADESISLAHGGRGEQDD
RRRGDGGSATAECGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSAL
IQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAA
GHGSLCPTAGMVGDAQLVSVDNVMMTCSHDVGMSSVYVCGSAGEQESSAA
SFV*
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