prot_Ecto-sp13_S_contig12.1709.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12.1709.1
Unique Nameprot_Ecto-sp13_S_contig12.1709.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12.1709.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 4.750e-11
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 0 
Query:    4 ASRRGRSSLVQLLLSERAIDINAASPDGWNSLMLASHGRHPRTVEVLIKGGASVSDGGGGDKDLTPLHVAAKVGDIVITTMLLRAGANVKATCAQTG 100
            A+  G    V  ++S  ++ IN  SP+GW  LMLA+ G + R V  L+  GA    G  GD+ +T LHV+A+ G +V++ ML+RAGA+V  +C  +G
Sbjct:   19 AANDGSFEQVFGIVSSGSVQINQGSPEGWTPLMLAADGGYSRIVSFLLHKGAIA--GIMGDEGVTALHVSARNGHVVVSLMLIRAGADVGLSCFTSG 113
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BLAST of mRNA_Ecto-sp13_S_contig12.1709.1 vs. uniprot
Match: A0A428UDF1_9HYPO (Uncharacterized protein n=1 Tax=Fusarium sp. AF-4 TaxID=1325735 RepID=A0A428UDF1_9HYPO)

HSP 1 Score: 57.0 bits (136), Expect = 3.690e-7
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0 
Query:   12 LVQLLLSERAIDINAASPDGWNSLMLASHGRHPRTVEVLIKGGASVSDGGGGDKDL---------TPLHVAAKVGDIVITTMLLRAGANVKAT 95
            +VQ LL E+  ++ A S DGW +L LA + + P  V +L++ GA V      +KD+         T LH AA++G  V+  +L++AGA+V+AT
Sbjct:    1 MVQRLL-EKGANVAAQSSDGWAALYLAVYYKQPEVVRLLLEHGADVDQK---NKDIDWRRPMGGVTALHAAAEIGSEVMARLLIKAGADVRAT 89
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12.1709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPL4_ECTSI4.750e-1140.21EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A428UDF1_9HYPO3.690e-737.63Uncharacterized protein n=1 Tax=Fusarium sp. AF-4 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 115..129
score: 38.68
coord: 66..81
score: 38.35
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 99..128
e-value: 3.3E-5
score: 33.3
coord: 30..59
e-value: 0.35
score: 19.9
coord: 65..94
e-value: 0.0057
score: 25.9
coord: 1..26
e-value: 4000.0
score: 0.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 65..97
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 99..131
score: 13.117
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 132..153
score: 9.751
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..153
e-value: 8.3E-39
score: 135.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..153
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 65..128
e-value: 3.2E-10
score: 40.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..153
score: 39.258
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 1..61
coord: 67..153
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 67..153
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12contigEcto-sp13_S_contig12:50027..50485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12.1709.1mRNA_Ecto-sp13_S_contig12.1709.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12 50027..50485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12.1709.1 ID=prot_Ecto-sp13_S_contig12.1709.1|Name=mRNA_Ecto-sp13_S_contig12.1709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
LLCASRRGRSSLVQLLLSERAIDINAASPDGWNSLMLASHGRHPRTVEVL
IKGGASVSDGGGGDKDLTPLHVAAKVGDIVITTMLLRAGANVKATCAQTG
CTPLHLASFVGYLRIMKLLLQFGADVDSRIANGGTALYISAESGQLEAVK
ILL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom