prot_Ecto-sp13_S_contig11978.1685.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11978.1685.1
Unique Nameprot_Ecto-sp13_S_contig11978.1685.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11978.1685.1 vs. uniprot
Match: D8LKW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 5.250e-7
Identity = 48/108 (44.44%), Postives = 56/108 (51.85%), Query Frame = 0 
Query:    1 MALLPSTPSTPPLITNHSSQSSFHPINTTHPC-LAKAAKPPAPLPTHRPPPLDPFRRQLLL--------------YPAARARSRLICECWLIC------RLARASPGR 87
            MALLPSTPSTPPL    SSQS+ H         L+   K P    + +PP L    ++++L              YPAAR RSRLICECWLIC      RLARA   R
Sbjct:    1 MALLPSTPSTPPL----SSQSTAHTARAASTLFLSLGQKTPYIHASPKPPSLQRRYQRIVLHRRILSAGCFSGCFYPAARERSRLICECWLICCCHRRRRLARAKADR 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11978.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKW7_ECTSI5.250e-744.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11978contigEcto-sp13_S_contig11978:907..1347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11978.1685.1mRNA_Ecto-sp13_S_contig11978.1685.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11978 907..2013 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11978.1685.1 ID=prot_Ecto-sp13_S_contig11978.1685.1|Name=mRNA_Ecto-sp13_S_contig11978.1685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MALLPSTPSTPPLITNHSSQSSFHPINTTHPCLAKAAKPPAPLPTHRPPP
LDPFRRQLLLYPAARARSRLICECWLICRLARASPGRPRAAIPLSTHRLQ
YQPLLKGKCPQRQGLLPSLQELERRHLRVDWPVDQVPRIGLLALRL*
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