prot_Ecto-sp13_S_contig11931.1648.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11931.1648.1
Unique Nameprot_Ecto-sp13_S_contig11931.1648.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.400e-37
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
Query:   26 QLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVVHENLFVSCGVDHLRLWTRVGGSFEVEKG 94
            +LVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPE VLGCHVVHENLFVSCGVDHLRLWTRVGG FEVEKG
Sbjct:  161 KLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPEPVLGCHVVHENLFVSCGVDHLRLWTRVGGRFEVEKG 229          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI001CF151B3 (LOW QUALITY PROTEIN: echinoderm microtubule-associated protein-like 6 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF151B3)

HSP 1 Score: 79.7 bits (195), Expect = 3.290e-15
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    3 QVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVV--HENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVS 100
            + LSV +GFHT+GVC V FS +G+L+V+VG D+ HS+AV+ W   + L ++    E +         ++ FV+CGV H++ WT  GG      G+RG ++
Sbjct: 1464 ETLSVIQGFHTKGVCAVSFSCNGKLLVTVGIDAGHSIAVWKWAEGSKLASSLGHTERIFVAEFRPDSDSQFVTCGVKHVKFWTLAGGQLV---GKRGVIN 1560          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI0009E5561A (echinoderm microtubule-associated protein-like 6 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5561A)

HSP 1 Score: 79.3 bits (194), Expect = 3.870e-15
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 QVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVV--HENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVS 100
            + LSV +GFHT+GVC V FS +G+L+V+VG D+AHS+AV+ W   + L ++    E +         ++ FV+CGV H++ W+  GG      G+RG ++
Sbjct:  329 ETLSVIQGFHTKGVCAVNFSCNGKLLVTVGIDAAHSIAVWKWAEGSKLASSHGHTERIFVAEFRPDSDSQFVTCGVKHVKFWSLAGGQLV---GKRGVIT 425          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI0009E1F9A3 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1F9A3)

HSP 1 Score: 79.3 bits (194), Expect = 4.410e-15
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 QVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVV--HENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVS 100
            + LSV +GFHT+GVC V FS +G+L+V+VG D+AHS+AV+ W   + L ++    E +         ++ FV+CGV H++ W+  GG      G+RG ++
Sbjct:  550 ETLSVIQGFHTKGVCAVNFSCNGKLLVTVGIDAAHSIAVWKWAEGSKLASSHGHTERIFVAEFRPDSDSQFVTCGVKHVKFWSLAGGQLV---GKRGVIT 646          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI0014258197 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258197)

HSP 1 Score: 79.3 bits (194), Expect = 4.490e-15
Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    1 TPQVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVVHEN--LFVSCGVDHLRLWTRVGGSFEVEKG 94
            T + +S+ RGFHT+GVC + FS  G+L++SVG D  HS+A++ WQ  + + ++P   + +       ++   FVS GV H++ WT  GG    ++G
Sbjct: 1451 TKKTISILRGFHTKGVCSLNFSATGKLLISVGIDEDHSIAIWRWQDGSKVASSPGHSKRIFLAEFRPDSDTQFVSIGVKHVKFWTLAGGQLICKRG 1546          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI0009E5D2B7 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5D2B7)

HSP 1 Score: 79.3 bits (194), Expect = 4.510e-15
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 QVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVV--HENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVS 100
            + LSV +GFHT+GVC V FS +G+L+V+VG D+AHS+AV+ W   + L ++    E +         ++ FV+CGV H++ W+  GG      G+RG ++
Sbjct: 1793 ETLSVIQGFHTKGVCAVNFSCNGKLLVTVGIDAAHSIAVWKWAEGSKLASSHGHTERIFVAEFRPDSDSQFVTCGVKHVKFWSLAGGQLV---GKRGVIT 1889          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: B3SCP1_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SCP1_TRIAD)

HSP 1 Score: 77.0 bits (188), Expect = 2.910e-14
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    3 QVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVVHENL--FVSCGVDHLRLWTRVGGSFEVEKGERG 97
            + LS+ RGFH  G+C V FS  G+LV++VG D  HSVAV+ WQ  T + T+    E +L      ++   FV+ GV H++ WT  GG+   ++G  G
Sbjct: 1463 ETLSILRGFHKGGICAVNFSSSGKLVLTVGIDDNHSVAVWQWQDGTRVATSHDHNERILYAQFRPDSNSHFVTVGVKHVKFWTVAGGALLGKRGVFG 1559          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: A0A8B8A0U1_ACAPL (echinoderm microtubule-associated protein-like 6 isoform X1 n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B8A0U1_ACAPL)

HSP 1 Score: 75.1 bits (183), Expect = 1.380e-13
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    1 TPQVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLF-TAPSGPETVLG-CHVVHENLFVSCGVDHLRLWTRVGGSFEVEKG 94
            T Q LS+ +GFHT+GVC V FS  G+L+++VG D  HSVAV+ WQ  T +  T        LG      +  FV+ GV H++ WT  GG    ++G
Sbjct: 1450 TKQTLSIIKGFHTKGVCSVNFSATGKLLLTVGIDDNHSVAVWRWQQGTKVAGTIGHSKRIFLGEFRPDSDQEFVTVGVKHVKFWTVAGGELIGKRG 1545          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: A0A8J1UMB4_OWEFU (Ofus.G151087 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UMB4_OWEFU)

HSP 1 Score: 73.6 bits (179), Expect = 4.770e-13
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    1 TPQVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETVLGCHVV--HENLFVSCGVDHLRLWTRVGGSFEVEKG 94
            T + LSV RGFH +GVC V FS  G+L+++VG D  HS+AV+ WQ  + + +A      +         ++ FV+ GV H++ WT  GG    +KG
Sbjct: 1203 TKETLSVIRGFHKKGVCCVDFSCGGKLLLTVGIDDDHSLAVWRWQDGSKVCSAAGHTSRIFHAEFRPDSDSAFVTVGVKHVKFWTIAGGELIGKKG 1298          
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Match: UPI001455D3E9 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455D3E9)

HSP 1 Score: 73.6 bits (179), Expect = 4.790e-13
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    1 TPQVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPETV-LG-CHVVHENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVSN 101
            T Q LS+ +GFHT+GVC V FS  G+L+++VG D  HSVAV+ WQ  T +  +    + + LG      +  FV+ GV H+  WT  GG      G RG +++
Sbjct: 1449 TKQTLSIIKGFHTKGVCSVNFSGSGKLLLTVGIDDNHSVAVWRWQQGTKVAGSIGHTKRIFLGEFRPDSDQEFVTVGVKHVTFWTVAGGQL---MGRRGLMNS 1548          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11931.1648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE32_ECTSI2.400e-3795.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001CF151B33.290e-1539.00LOW QUALITY PROTEIN: echinoderm microtubule-associ... [more]
UPI0009E5561A3.870e-1539.00echinoderm microtubule-associated protein-like 6 n... [more]
UPI0009E1F9A34.410e-1539.00echinoderm microtubule-associated protein-like 6 n... [more]
UPI00142581974.490e-1536.46echinoderm microtubule-associated protein-like 6 n... [more]
UPI0009E5D2B74.510e-1539.00echinoderm microtubule-associated protein-like 6 n... [more]
B3SCP1_TRIAD2.910e-1440.21Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
A0A8B8A0U1_ACAPL1.380e-1341.67echinoderm microtubule-associated protein-like 6 i... [more]
A0A8J1UMB4_OWEFU4.770e-1338.54Ofus.G151087 protein n=1 Tax=Owenia fusiformis Tax... [more]
UPI001455D3E94.790e-1339.81echinoderm microtubule-associated protein-like 6 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 46..83
e-value: 9.7
score: 10.8
coord: 1..43
e-value: 0.0022
score: 27.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..95
e-value: 1.2E-20
score: 75.6
NoneNo IPR availablePANTHERPTHR13720:SF16ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 5coord: 4..99
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 4..99
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11931contigEcto-sp13_S_contig11931:1903..2453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11931.1648.1mRNA_Ecto-sp13_S_contig11931.1648.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11931 1903..2453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11931.1648.1 ID=prot_Ecto-sp13_S_contig11931.1648.1|Name=mRNA_Ecto-sp13_S_contig11931.1648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
TPQVLSVFRGFHTEGVCQVCFSPDGQLVVSVGKDSAHSVAVFHWQSRTTL
FTAPSGPETVLGCHVVHENLFVSCGVDHLRLWTRVGGSFEVEKGERGYVS
NH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf