prot_Ecto-sp13_S_contig11929.1643.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11929.1643.1
Unique Nameprot_Ecto-sp13_S_contig11929.1643.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11929.1643.1 vs. uniprot
Match: D7G1M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M4_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 4.790e-71
Identity = 123/131 (93.89%), Postives = 125/131 (95.42%), Query Frame = 0 
Query:    3 ERDGGNDGVADIDQTIDRYDYLIAFPHTREQAARSGGRRRRSELSTVDDGEGSDDSDSDTGGFEAAKRITLTEVNDIWYSAVPGDEVTKTAAKASLAREWEARFRTPSDDSEEVSISQSEWVRLAREVIVN 133
            ERDGGNDGVADIDQTIDRYDYLIAFPH REQAAR+GGR RRSELS V DGEGSDDSDSDTGGFEAA+RITLTEVNDIWYSAVPGDEVTKTAAK SLAREWEARFRTPS DSEEVSISQSEWVRLAREVIVN
Sbjct:   92 ERDGGNDGVADIDQTIDRYDYLIAFPHPREQAARAGGRGRRSELSAVGDGEGSDDSDSDTGGFEAAQRITLTEVNDIWYSAVPGDEVTKTAAKESLAREWEARFRTPSADSEEVSISQSEWVRLAREVIVN 222
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BLAST of mRNA_Ecto-sp13_S_contig11929.1643.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.120e-22
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 0 
Query:   17 TIDRYDYLIAFPHTREQAARSGGRRRRSELSTVDDGEGSDDSDSDTGGFEAAKRITLTEVNDIWYSAVPGDEVTKTAAKASLAREWEARFRTPSD-----DSEEVSISQSEWVRLAREVIVN 133
            T+DRYDYLI FP+  E   +S  R      S  D G  +   D+D G  EA   ITL EV +IWYSAVPGDEV K  A+  L RE++ARFRTP++     +S E+++S++EW+RLAREVI+N
Sbjct:  829 TVDRYDYLIIFPNPAEDK-KSRYRDVEEACSAGDGGARTHAGDADAG--EAGTFITLGEVAEIWYSAVPGDEVAKHEAQDKLRREFDARFRTPAEFSNLEESREMTMSRNEWLRLAREVIIN 947
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11929.1643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1M4_ECTSI4.790e-7193.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL56_9STRA1.120e-2250.00Calcium-activated chloride channel-domain-containi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11929contigEcto-sp13_S_contig11929:2441..4588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11929.1643.1mRNA_Ecto-sp13_S_contig11929.1643.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11929 2441..4588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11929.1643.1 ID=prot_Ecto-sp13_S_contig11929.1643.1|Name=mRNA_Ecto-sp13_S_contig11929.1643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
GGERDGGNDGVADIDQTIDRYDYLIAFPHTREQAARSGGRRRRSELSTVD
DGEGSDDSDSDTGGFEAAKRITLTEVNDIWYSAVPGDEVTKTAAKASLAR
EWEARFRTPSDDSEEVSISQSEWVRLAREVIVN
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