prot_Ecto-sp13_S_contig11911.1632.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11911.1632.1
Unique Nameprot_Ecto-sp13_S_contig11911.1632.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11911.1632.1 vs. uniprot
Match: D7FIR2_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR2_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 6.460e-123
Identity = 209/218 (95.87%), Postives = 211/218 (96.79%), Query Frame = 0 
Query:    1 MEKCRQQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQQXXXXXXXXXRKTKAREELRLQIDKSRAIQIRQRAEREEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQAREHNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLNHKNPDMFPAGNLNL 218
            MEKCRQQRDVLDRAARARKSLE KRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQ XXXXXX    KTKAREELRLQID+SRAIQIRQRAE+EEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQARE NAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLNHKNPDMFPAGNLNL
Sbjct:  253 MEKCRQQRDVLDRAARARKSLETKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQXXXXXXXAAANKTKAREELRLQIDRSRAIQIRQRAEKEEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQARERNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLNHKNPDMFPAGNLNL 470
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BLAST of mRNA_Ecto-sp13_S_contig11911.1632.1 vs. uniprot
Match: A0A6H5KEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN4_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 1.180e-121
Identity = 204/218 (93.58%), Postives = 208/218 (95.41%), Query Frame = 0 
Query:    1 MEKCRQQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQQXXXXXXXXXRKTKAREELRLQIDKSRAIQIRQRAEREEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQAREHNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLNHKNPDMFPAGNLNL 218
            MEKCR+QRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEE+EALQQ XX       KTKAREELRLQIDKSRAIQIRQRAE+EEAQRAEDKEINAYFRQRTSEMDRLDKEE AARLAREKQLRNSQKLQARE NAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTL+HKNPDMFPAGNLNL
Sbjct:  279 MEKCRKQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEREALQQRXXEDDAAASKTKAREELRLQIDKSRAIQIRQRAEKEEAQRAEDKEINAYFRQRTSEMDRLDKEEAAARLAREKQLRNSQKLQARERNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLSHKNPDMFPAGNLNL 496
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BLAST of mRNA_Ecto-sp13_S_contig11911.1632.1 vs. uniprot
Match: A0A835YVV5_9STRA (TPH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.720e-16
Identity = 71/203 (34.98%), Postives = 100/203 (49.26%), Query Frame = 0 
Query:    1 MEKCRQQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQQXXXXXXXXXRKTKAREELRLQIDKSRAIQIRQRAEREEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQAREHNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTL 203
            +++C ++R  L+  A ARK+LE  RF E+QA+RQ MID+AT EL       DN+EE+EA +Q         R+   R      I++SRA     RA      R E + I AY+RQ   E    ++ E A  L R   ++ SQ  Q RE   +       +   HAR  A   +E  RF      + D+  A G+STY+L R L
Sbjct:  245 LQRCEEERGALNALAAARKALEGLRFQERQAVRQAMIDRATAELLKRSADIDNREEREAKEQRAREDAEAERRRDMRTCEHAAIEESRAQARAARAAAAADARLEGERIKAYYRQCAEEAAHQEEAEAAEALRRNLAVKASQVEQRREARERKALEDERQAAQHARLAAVAEEEKRRFAAAAQVHADELQAHGRSTYMLRRAL 447
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11911.1632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIR2_ECTSI6.460e-12395.87TPH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KEN4_9PHAE1.180e-12193.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVV5_9STRA2.720e-1634.98TPH domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableCOILSCoilCoilcoord: 37..67
IPR039986Coiled-coil domain-containing protein 173PANTHERPTHR28663FAMILY NOT NAMEDcoord: 2..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11911contigEcto-sp13_S_contig11911:48..3955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11911.1632.1mRNA_Ecto-sp13_S_contig11911.1632.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11911 48..3955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11911.1632.1 ID=prot_Ecto-sp13_S_contig11911.1632.1|Name=mRNA_Ecto-sp13_S_contig11911.1632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MEKCRQQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKA
EDNKEEKEALQQRQKEDDAAARKTKAREELRLQIDKSRAIQIRQRAEREE
AQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQAREHN
AKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLH
RTLNHKNPDMFPAGNLNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039986CCDC173