prot_Ecto-sp13_S_contig11906.1627.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11906.1627.1
Unique Nameprot_Ecto-sp13_S_contig11906.1627.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length240
Homology
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Match: A0A6H5JM89_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM89_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 2.150e-100
Identity = 203/240 (84.58%), Postives = 206/240 (85.83%), Query Frame = 0
Query:    1 MEQEQPETPGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDLAMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGASNPAANLGRAGVKQFVGAGEAQSRAQVKKAIAKDAAQQSAETIRREGLELAKQQAEISKSVAXXXXXXXXDVQRGRELSEQEAGRXXXXXXXXXXXXXXAQAKDDLKGELDCLDPDDEDNTARRAQIKRDLAKLYRTPVSKFTADAAISN 240
            MEQEQP+TPGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDLAMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGAS+PAANLGRAGVKQFVGAGEAQSRAQV                             IS+SV XXXXXXXX VQRGRELSEQEAGRXXXXXXXXXXXXXX QAKDDLKGELD LDPDDEDNTARRAQIKRDLAKLYRTPVSKFTADAA SN
Sbjct:  293 MEQEQPKTPGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDLAMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGASDPAANLGRAGVKQFVGAGEAQSRAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISRSVXXXXXXXXXXVQRGRELSEQEAGRXXXXXXXXXXXXXXXQAKDDLKGELDRLDPDDEDNTARRAQIKRDLAKLYRTPVSKFTADAATSN 532          
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Match: A0A6H5KWS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS8_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.560e-8
Identity = 73/222 (32.88%), Postives = 100/222 (45.05%), Query Frame = 0
Query:   25 YPERPPNWMPYYFLTFCFFGRPSNS-EDTDL-AMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGG---------ASNPAANLGRAGVKQFVGAGEAQSRAQVKKAIAKDAAQQSAETIRREGLELAKQQAEISKSVAXXXXXXXXDVQRGRELSEQEAGRXXXXXXXXXXXXXXAQAKDDLKGELDCLDPDDEDNTARRAQIKRDLAKLYRTPVSKFTAD 235
            Y  RP NW     LTFCFFGRP+   EDT+L    A SGP   SR +K+                             NP   L    V+QFVGAGEAQSRA+VKKA  +   +QS +  R + L    +Q E++K +         +    R L E+EA R               QA +DL+G+L       E + A+  ++K  +  + + PV +FTAD
Sbjct:  202 YGPRPANWTHPLTLTFCFFGRPAGEHEDTELNTCAASSGPP--SRGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXLTENP---LHAGAVRQFVGAGEAQSRAKVKKATQEVELRQSRDAARAQFLRQNTEQLEVAKEMRDAVKRVADNTTAQRALQEEEACRKRKK-----------QAIEDLEGDLQYC----ESHEAKAIKLK--IRAMRKMPVGQFTAD 401          
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Match: A0A6H5JU95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU95_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.210e-7
Identity = 49/101 (48.51%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   36 YFLTFCFFGRPSNSEDTDL-AMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGASNPAANLGRAGVKQFVGAGEAQSRAQVKKAIAKDAAQQSAETIRR 135
            Y LT+C  GRPS+SED DL   +  SGP G    +K KK S  S+SDG SGSE   +    +L  + ++ F GAGE QSRAQVKK  A  AA  + E  RR
Sbjct:    4 YLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSP-STSDG-SGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQARR 102          
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Match: A0A6H5K3M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M7_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.690e-6
Identity = 66/171 (38.60%), Postives = 84/171 (49.12%), Query Frame = 0
Query:   36 YFLTFCFFGRPSNSEDTDL-AMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGASNPAANLGRAGVKQFVGAGEAQSRAQVKK---AIAKDAAQQSAETIRREGLELAKQQAEISKSVAXXXXXXXXDVQRGRELSEQEAGRXXXXXXXXXXXXXXAQAK-DDLKGELD 201
            Y LT+C  GRPS+SED DL   +  SGP G    +K K  S  S+SDG SGSE   +    +L  + ++ F GAGE QSRAQVKK   A+A   AQ+ A  +         QQA   K V          V R + L E+ A R               QAK DDL+G+L+
Sbjct:    4 YLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKVKNGSP-STSDG-SGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQAPRV---------QQAHTGKLVTAVEALSAAVVSR-QALDEEAAHRARWDYARLAK-----QAKIDDLRGKLE 157          
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.940e-5
Identity = 74/239 (30.96%), Postives = 103/239 (43.10%), Query Frame = 0
Query:    9 PGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDLAM-KAGSGPSGDSRPRKKKKA------------SLGSSSD--GGSGSEGGASNPAANLGRAGVKQFVGAGEAQSRAQVKKAIAKDAAQQSAETIRREGLELAKQQAEISKSVAXXXXXXXXDVQRGRELSEQEAGRXXXXXXXXXXXXXXAQAKDDLKGELDCLDPDDEDNTARRAQIKRDLAKLYRTPVSKF 232
            P E++  G + E    YP RP  WM    L +CF GRPS+SED DLA  +  SGP      RK                S G S    GG GS+G       NL    ++ F GAGE QSRAQV+K  A+  ++ + E  R++ L    Q  +  K++A         V   R L E+ A R               +  ++++G L+  + D       RA IK     +Y  P+S F
Sbjct:  243 PSEDEQAGDDGE----YPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRKSXXXXXXXXXXXXXXXSTGESETEPGGVGSDG-------NLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTLAD-------SVAARRVLDEEAAVRARETAAESRKQ----RKVNNMRGLLEFSEVDSAQYYELRAAIKA----VYHQPLSDF 455          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11906.1627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JM89_9PHAE2.150e-10084.58Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWS8_9PHAE6.560e-832.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU95_9PHAE1.210e-748.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3M7_9PHAE1.690e-638.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L481_9PHAE1.940e-530.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11906contigEcto-sp13_S_contig11906:3934..4653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11906.1627.1mRNA_Ecto-sp13_S_contig11906.1627.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11906 3919..4653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11906.1627.1 ID=prot_Ecto-sp13_S_contig11906.1627.1|Name=mRNA_Ecto-sp13_S_contig11906.1627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp
MEQEQPETPGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSE
DTDLAMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSEGGASNPAANLGRA
GVKQFVGAGEAQSRAQVKKAIAKDAAQQSAETIRREGLELAKQQAEISKS
VAKAVAQVAADVQRGRELSEQEAGRKRKLEEEEACRKRKAQAKDDLKGEL
DCLDPDDEDNTARRAQIKRDLAKLYRTPVSKFTADAAISN
back to top