prot_Ecto-sp13_S_contig119.1617.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig119.1617.1
Unique Nameprot_Ecto-sp13_S_contig119.1617.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig119.1617.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 6.380e-36
Identity = 75/81 (92.59%), Postives = 75/81 (92.59%), Query Frame = 0 
Query:    1 MAANGSELFLDRATRVRKIQQIAAFLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYNNRINKKLSKVQKVRHQQAMQ 81
            MAANGSELFLDR TRVRKIQQIA FLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYN RINKKLSKV   RHQQAMQ
Sbjct:    1 MAANGSELFLDRNTRVRKIQQIATFLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYNTRINKKLSKV---RHQQAMQ 78
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BLAST of mRNA_Ecto-sp13_S_contig119.1617.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 9.800e-12
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    3 ANGSEL-FLDRATRVRKIQQIAAFLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYNNRINKKLSKVQKV 74
            A GS+L  +DR    R   QIA FLA +EGKD  D SLH LA +FENQIF+ A++ +DY  RINKKLS+V+K+
Sbjct:    5 AAGSDLQHVDRHACTR---QIAEFLANLEGKDKNDASLHELAGRFENQIFSVAVDFKDYQERINKKLSRVRKL 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig119.1617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE6.380e-3692.59KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CHY1_9STRA9.800e-1256.16KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
NoneNo IPR availableGENE3D1.10.246.20coord: 8..85
e-value: 6.6E-9
score: 37.7
IPR036546Mediator complex subunit 15, KIX domainPFAMPF16987KIX_2coord: 11..81
e-value: 1.7E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig119contigEcto-sp13_S_contig119:25067..26878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig119.1617.1mRNA_Ecto-sp13_S_contig119.1617.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig119 24996..26878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig119.1617.1 ID=prot_Ecto-sp13_S_contig119.1617.1|Name=mRNA_Ecto-sp13_S_contig119.1617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MAANGSELFLDRATRVRKIQQIAAFLAQIEGKDPQDRSLHGLAQKFENQI
FTAAMNVEDYNNRINKKLSKVQKVRHQQAMQQQQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036546MED15_KIX