prot_Ecto-sp13_S_contig11892.1611.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11892.1611.1
Unique Nameprot_Ecto-sp13_S_contig11892.1611.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11892.1611.1 vs. uniprot
Match: D7FN35_ECTSI (Chorein N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN35_ECTSI)

HSP 1 Score: 642 bits (1656), Expect = 1.810e-219
Identity = 330/346 (95.38%), Postives = 339/346 (97.98%), Query Frame = 0 
Query:    1 NSYVTAVAAAVAAARNKATNPRPGTSGSLPGGGLTPAANNKGAAAAAKAVRALFLQKWKSERHALLFKPLAVEIGAEVHQWDQPGGKSITPTYRVARLNVGVGELQAVVDSEQGRVVGAVVDEIVNLVRRSRFNRFIPQAYLPLRNLPPPKVHPPKPAKDGAPAGMLPSVETWSWASEMGGKTGVGRPKSAAEAVVVGGFAREGGAWARAMWRFAGACVRHDIRLALTKKLPASLPNWDGTISAEPSPSPGHPAMVAKPATNGVPPAGMDPASASLSWRVGYLRLHARTLLARDAKSLGSS-GGHRGVDVRRLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR 345
            +SYVTAVAAAVAAARNKATNPRPG SGSLPGGGLTPAANN GAAAAAKAVRALFLQKWKSERHALLFKPLAVEIGAEVHQWDQPGGKSI PTYRVARLNVGVGELQAVVDSEQGRVVGAVVDEI+NLVRRSRFNRFIPQAYLPLRNLPPPKVHPPKPAKDGAPAGMLPSVETWSWASEMGGKTGVGRPKSAAEAV+VGGFA+EGG+WARAMWRFAGACVRHDIRLALTKKLPASLPNW+G ISA+PSPSPGHP +VAKPATNGVPPAGMDPASASLSWRV YLRLHARTLLARDAK+LGSS GGHRGVDVRRLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR
Sbjct:  296 DSYVTAVAAAVAAARNKATNPRPGASGSLPGGGLTPAANNSGAAAAAKAVRALFLQKWKSERHALLFKPLAVEIGAEVHQWDQPGGKSIAPTYRVARLNVGVGELQAVVDSEQGRVVGAVVDEIINLVRRSRFNRFIPQAYLPLRNLPPPKVHPPKPAKDGAPAGMLPSVETWSWASEMGGKTGVGRPKSAAEAVLVGGFAKEGGSWARAMWRFAGACVRHDIRLALTKKLPASLPNWNGAISADPSPSPGHPDVVAKPATNGVPPAGMDPASASLSWRVAYLRLHARTLLARDAKNLGSSSGGHRGVDVRRLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR 641
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BLAST of mRNA_Ecto-sp13_S_contig11892.1611.1 vs. uniprot
Match: A0A6H5KF13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF13_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.580e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:  300 SSGGHRGVDVRRLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR 345
            +SGGHRGVDVR+LGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR
Sbjct:   11 NSGGHRGVDVRKLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11892.1611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FN35_ECTSI1.810e-21995.38Chorein N-terminal domain-containing protein n=1 T... [more]
A0A6H5KF13_9PHAE2.580e-1895.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11892contigEcto-sp13_S_contig11892:375..5136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11892.1611.1mRNA_Ecto-sp13_S_contig11892.1611.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11892 375..5136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11892.1611.1 ID=prot_Ecto-sp13_S_contig11892.1611.1|Name=mRNA_Ecto-sp13_S_contig11892.1611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
NSYVTAVAAAVAAARNKATNPRPGTSGSLPGGGLTPAANNKGAAAAAKAV
RALFLQKWKSERHALLFKPLAVEIGAEVHQWDQPGGKSITPTYRVARLNV
GVGELQAVVDSEQGRVVGAVVDEIVNLVRRSRFNRFIPQAYLPLRNLPPP
KVHPPKPAKDGAPAGMLPSVETWSWASEMGGKTGVGRPKSAAEAVVVGGF
AREGGAWARAMWRFAGACVRHDIRLALTKKLPASLPNWDGTISAEPSPSP
GHPAMVAKPATNGVPPAGMDPASASLSWRVGYLRLHARTLLARDAKSLGS
SGGHRGVDVRRLGVPKGREPLSLEEMWDVAKVESFAPGDEVVFLR*
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