prot_Ecto-sp13_S_contig11857.1592.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11857.1592.1
Unique Nameprot_Ecto-sp13_S_contig11857.1592.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11857.1592.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.720e-18
Identity = 50/58 (86.21%), Postives = 50/58 (86.21%), Query Frame = 0 
Query:    1 MFFYESFRVANEREPEAMLRLQQQLKPETLKECQEHFAEAQKQQAAAAAA---GGTPA 55
            MFFYESFRVANEREPEAMLRLQQQLKPETLKECQEHFAEAQKQQA        GGTPA
Sbjct:  978 MFFYESFRVANEREPEAMLRLQQQLKPETLKECQEHFAEAQKQQAXXXXXXXXGGTPA 1035
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11857.1592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN40_9PHAE1.720e-1886.21Importin N-terminal domain-containing protein n=2 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11857contigEcto-sp13_S_contig11857:3109..3496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11857.1592.1mRNA_Ecto-sp13_S_contig11857.1592.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11857 2993..3588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11857.1592.1 ID=prot_Ecto-sp13_S_contig11857.1592.1|Name=mRNA_Ecto-sp13_S_contig11857.1592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MFFYESFRVANEREPEAMLRLQQQLKPETLKECQEHFAEAQKQQAAAAAA
GGTPA*
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