prot_Ecto-sp13_S_contig11856.1591.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11856.1591.1
Unique Nameprot_Ecto-sp13_S_contig11856.1591.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
BLAST of mRNA_Ecto-sp13_S_contig11856.1591.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.450e-69
Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 0
Query:    1 SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGRVGKGSDNGKAKAKGSNVK 127
            SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGRVGKG DN KAKAKG+N+K
Sbjct:  710 SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGRVGKGGDNAKAKAKGTNLK 836          
BLAST of mRNA_Ecto-sp13_S_contig11856.1591.1 vs. uniprot
Match: A0A6H5JJC0_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC0_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.430e-68
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0
Query:    1 SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGRVGKGSDNGKAKAKGSNVK 127
            SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGR GKG DN KA AKG++VK
Sbjct:  341 SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKVYQSTTSKGRQGKGGDNAKANAKGNDVK 467          
BLAST of mRNA_Ecto-sp13_S_contig11856.1591.1 vs. uniprot
Match: UPI0006B0DB64 (uncharacterized protein LOC106460649 isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0DB64)

HSP 1 Score: 58.9 bits (141), Expect = 1.500e-7
Identity = 28/73 (38.36%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   26 VLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRA 98
            +LE S L+PFL+Q LE +S +++ RH  +Y ++ +L++ IA   +L PL GP+  QK  +S+++ L +L  +A
Sbjct:  545 ILENSSLIPFLEQYLEQESFVEISRHTGIYKAIIQLLKEIAQQPTLVPLFGPLPNQK--QSIHQFLGRLAQQA 615          
BLAST of mRNA_Ecto-sp13_S_contig11856.1591.1 vs. uniprot
Match: A0A151ZFA9_9MYCE (Baculoviral IAP repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFA9_9MYCE)

HSP 1 Score: 51.2 bits (121), Expect = 7.230e-5
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   26 VLEESCLVPFLQQLLENDSLLDVDRHAALYTSVFKLVRCIAS 67
            +LEESCLVPF++    + SLLDV+RHA L+TS+ KL+  ++S
Sbjct:  457 ILEESCLVPFIESYCRDISLLDVERHADLWTSILKLMETMSS 498          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11856.1591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMN8_ECTSI1.450e-6996.85Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JJC0_9PHAE1.430e-6895.28UBC core domain-containing protein n=1 Tax=Ectocar... [more]
UPI0006B0DB641.500e-738.36uncharacterized protein LOC106460649 isoform X1 n=... [more]
A0A151ZFA9_9MYCE7.230e-554.76Baculoviral IAP repeat-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11856contigEcto-sp13_S_contig11856:520..2997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11856.1591.1mRNA_Ecto-sp13_S_contig11856.1591.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11856 520..2997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11856.1591.1 ID=prot_Ecto-sp13_S_contig11856.1591.1|Name=mRNA_Ecto-sp13_S_contig11856.1591.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
SGRKRKKLTFAMEEYRVDSVNSSLRVLEESCLVPFLQQLLENDSLLDVDR
HAALYTSVFKLVRCIASWRSLHPLLGPMKGQKPRRSLYRLLSKLGDRAKV
YQSTTSKGRVGKGSDNGKAKAKGSNVK*
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