prot_Ecto-sp13_S_contig11832.1578.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11832.1578.1
Unique Nameprot_Ecto-sp13_S_contig11832.1578.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11832.1578.1 vs. uniprot
Match: D8LL46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL46_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 5.210e-53
Identity = 89/108 (82.41%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:    1 MAVPIAPFDVHTDDVYSFPTYFRGFPVAHSLENLCVAPEVTAPSKTDTSFLEGETLCLVVPIREYPRASKTDDDTCAALTCREAGACSLAKFPTVAPFDLRDFHERAV 108
            M V IAPFDVHTD +YSFPTYFRGF VAHSLE+LCVAPEVTAPS TDTSF+EGETLCLVVPIR+YPRASKTDD+T AALTC EAGAC LA  PTVAP DLR  HER V
Sbjct:  130 MTVSIAPFDVHTDGMYSFPTYFRGFQVAHSLEDLCVAPEVTAPSGTDTSFMEGETLCLVVPIRKYPRASKTDDETFAALTCDEAGACVLATLPTVAPLDLRHIHERLV 237
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BLAST of mRNA_Ecto-sp13_S_contig11832.1578.1 vs. uniprot
Match: D7FGZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.790e-13
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   67 RASKTDDDTCAALTCREAGACSLAKFPTVAPFDLRDFHERAV 108
            RASKTDD+TCAALTC EAGAC+LA  PT+AP DLRD HER V
Sbjct:    4 RASKTDDETCAALTCHEAGACALATLPTLAPLDLRDIHERVV 45
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11832.1578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL46_ECTSI5.210e-5382.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FGZ7_ECTSI2.790e-1378.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11832contigEcto-sp13_S_contig11832:2719..4550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11832.1578.1mRNA_Ecto-sp13_S_contig11832.1578.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11832 2703..4550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11832.1578.1 ID=prot_Ecto-sp13_S_contig11832.1578.1|Name=mRNA_Ecto-sp13_S_contig11832.1578.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
MAVPIAPFDVHTDDVYSFPTYFRGFPVAHSLENLCVAPEVTAPSKTDTSF
LEGETLCLVVPIREYPRASKTDDDTCAALTCREAGACSLAKFPTVAPFDL
RDFHERAV*
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