prot_Ecto-sp13_S_contig11806.1557.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11806.1557.1
Unique Nameprot_Ecto-sp13_S_contig11806.1557.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.520e-21
Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGRCAPNAL 78
            +  H  G+LP +KS VEELF   L KVVFATETLAAGVNMPAR+TVI+ LSKR DTGI+ L PSQLLQM GR     L
Sbjct:  525 IAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGL 602          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: K8YRA8_NANGC (Type iii restriction res subunit n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRA8_NANGC)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-21
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    4 HETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            H  GLLPV+K+ VEELF E L++VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GR
Sbjct:  104 HHAGLLPVYKALVEELFNENLIRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGR 172          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A2P2KHL0_RHIMU (DEAD-box ATP-dependent RNA helicase ISE2ic-like n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KHL0_RHIMU)

HSP 1 Score: 95.9 bits (237), Expect = 2.790e-21
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            V  H  G LP++KSF+EELF   LVKVVFATETLAAG+NMPAR  VI++LSKRI TG ++L+P++LLQM GR
Sbjct:  103 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRIGTGRIQLSPNELLQMAGR 174          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: K9S7S3_9CYAN (DSH domain protein n=2 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S7S3_9CYAN)

HSP 1 Score: 95.5 bits (236), Expect = 3.830e-21
Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            V  H  GLLP +K+FVEELF + LVKVVFATETLAAG+NMPAR TVI++LSKR D G   LNPS+ LQM GR
Sbjct:  359 VASHHAGLLPAWKAFVEELFQQGLVKVVFATETLAAGINMPARTTVISSLSKRTDRGHRLLNPSEFLQMAGR 430          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A200QV60_9MAGN (Helicase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QV60_9MAGN)

HSP 1 Score: 95.5 bits (236), Expect = 3.860e-21
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            V  H  G LP++KSFVEELF   LVK+VFATETLAAG+NMPAR TVI++LSKR ++G ++L+P++LLQM GR
Sbjct:  446 VAAHHAGCLPLWKSFVEELFQRGLVKIVFATETLAAGINMPARTTVISSLSKRCESGRIQLSPNELLQMAGR 517          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: W7TFJ8_9STRA (Dsh domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFJ8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.190e-21
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    4 HETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            H  GLLPV+K+ VEELF E L++VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GR
Sbjct:  310 HHAGLLPVYKALVEELFNENLIRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGR 378          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.290e-21
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    4 HETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            H  GLLPV+K+ VEELF E L++VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GR
Sbjct:  568 HHAGLLPVYKALVEELFNENLIRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGR 636          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A7J9HH88_9ROSI (Helicase C-terminal domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9HH88_9ROSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.130e-21
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            V  H  G LP++KSFVEELF   LVKVVFATETLAAG+NMPAR  VI++LSKR  TG ++L+P++LLQM GR
Sbjct:  207 VAAHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRTSTGRIQLSPNELLQMAGR 278          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: A0A0D2SDF5_GOSRA (Uncharacterized protein n=24 Tax=Gossypium TaxID=3633 RepID=A0A0D2SDF5_GOSRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.190e-21
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            V  H  G LP++KSFVEELF   LVKVVFATETLAAG+NMPAR  VI++LSKR  TG ++L+P++LLQM GR
Sbjct:  511 VAAHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRTSTGRIQLSPNELLQMAGR 582          
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Match: K9RM06_9CYAN (Superfamily II RNA helicase n=2 Tax=Nostocales TaxID=1161 RepID=K9RM06_9CYAN)

HSP 1 Score: 94.4 bits (233), Expect = 9.740e-21
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGR 72
            +  H  G+LP +K+ VEELF + L+KVVFATETLAAG+NMPAR TVI+TLSKR D+G   LNPS+ LQM GR
Sbjct:  322 IAAHHAGILPAWKTLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDSGHRLLNPSEFLQMAGR 393          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11806.1557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z819_9STRA1.520e-2166.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YRA8_NANGC1.970e-2172.46Type iii restriction res subunit n=1 Tax=Nannochlo... [more]
A0A2P2KHL0_RHIMU2.790e-2166.67DEAD-box ATP-dependent RNA helicase ISE2ic-like n=... [more]
K9S7S3_9CYAN3.830e-2169.44DSH domain protein n=2 Tax=Geitlerinema sp. PCC 74... [more]
A0A200QV60_9MAGN3.860e-2165.28Helicase n=1 Tax=Macleaya cordata TaxID=56857 RepI... [more]
W7TFJ8_9STRA5.190e-2172.46Dsh domain protein n=1 Tax=Nannochloropsis gaditan... [more]
A0A4D9D0G8_9STRA5.290e-2172.46Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7J9HH88_9ROSI7.130e-2166.67Helicase C-terminal domain-containing protein n=3 ... [more]
A0A0D2SDF5_GOSRA7.190e-2166.67Uncharacterized protein n=24 Tax=Gossypium TaxID=3... [more]
K9RM06_9CYAN9.740e-2165.28Superfamily II RNA helicase n=2 Tax=Nostocales Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..74
e-value: 7.1E-22
score: 79.8
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..72
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 1..72
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11806contigEcto-sp13_S_contig11806:3820..4710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11806.1557.1mRNA_Ecto-sp13_S_contig11806.1557.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11806 3820..4710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11806.1557.1 ID=prot_Ecto-sp13_S_contig11806.1557.1|Name=mRNA_Ecto-sp13_S_contig11806.1557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
VVCHETGLLPVFKSFVEELFAEALVKVVFATETLAAGVNMPARATVITTL
SKRIDTGIVKLNPSQLLQMGGRCAPNALIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase