prot_Ecto-sp13_S_contig11793.1541.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11793.1541.1
Unique Nameprot_Ecto-sp13_S_contig11793.1541.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length643
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11793.1541.1 vs. uniprot
Match: A0A6H5J7Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z7_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 2.320e-195
Identity = 590/643 (91.76%), Postives = 600/643 (93.31%), Query Frame = 0 
Query:    1 MKGPRCVVEGCESVASRAPPGGTAGVVCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKKCVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRFSSQEEGDCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVADVVSAAPLAPDSTQITEKRNMKPNPSERPVDLKRVKRNPEGIELPGFSLSGDAPAVTPATGRLDLRAVAATPAVLTTFSSTXXXXXXXXXXXXXXXXXXXXXXXXXARGVAMTTVAVGGLETAGRARVLEAAPRGATGDTKSAMTFQFFPGSSGGSTGLTVGLRTAQQGGLGASRAGQGSGEVSVVHNGGIVAGAVADYQGKHGGGVAPAAFRGQGADGTGNVAASHGVARGAVGATSLGNNSGFSALHGQAGGGEAGSSASVFPPGASEIPVHGGAMGRGGEGGGAAAAIGVLPSSQPPGGDGGEAMRPAAEGDVDGGVVVPHRT-GVSV 642
            MKGPRCVVEGCESVASRAPPG TAGVVCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RFSSQEEGDCE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVADVV+AA LAPDSTQ TEK+ MKPNPSERPVD KRVKRNP+ IELPGFSLSGD PAV PATG LD+RAVAATPAVLTTF+ST  XXXXXXXXXXXXXXXXXXXX   ARGVAMTTVAVGG+ETAGRARVLEAAPRGATGDTKSAMTFQFFPGSSGGST +T GLRTAQQGGLGASRA  GS EVS VHNGG+VAG VADYQGKHGGG APAAFRGQGADGTGNVAASHGVARG VGATSLGNNSG SALHGQ GGGEAGSSASVFP G  EIPVHGGAMG G EG   AAAIGVLPSSQPPGG+GG+AM PAAEGDV GGVVVPH T GVSV
Sbjct:    1 MKGPRCVVEGCESVASRAPPGSTAGVVCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFSSQEEGDCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVADVVAAASLAPDSTQSTEKQEMKPNPSERPVDPKRVKRNPDSIELPGFSLSGDPPAVAPATGPLDVRAVAATPAVLTTFASTAAXXXXXXXXXXXXXXXXXXXX---ARGVAMTTVAVGGVETAGRARVLEAAPRGATGDTKSAMTFQFFPGSSGGSTEMTAGLRTAQQGGLGASRARHGSSEVSAVHNGGVVAGVVADYQGKHGGGGAPAAFRGQGADGTGNVAASHGVARGVVGATSLGNNSGSSALHGQVGGGEAGSSASVFPQGGGEIPVHGGAMGGGVEGXXXAAAIGVLPSSQPPGGEGGKAMCPAAEGDVSGGVVVPHSTTGVSV 640
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11793.1541.1 vs. uniprot
Match: D7G0R4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R4_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 6.010e-51
Identity = 127/132 (96.21%), Postives = 128/132 (96.97%), Query Frame = 0 
Query:    1 MKGPRCVVEGCESVASRAPPGGTAGVVCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKKCVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRFSSQEEGDCE 132
            MKGPRCVVEGCESVASRAPPGGTAG+VCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RFSSQEEGDCE
Sbjct:    1 MKGPRCVVEGCESVASRAPPGGTAGIVCIQHSQPGMVNLVNWTQCSGSNCGKYPTYGVEGTSNREYCREHALSGMVDVHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFSSQEEGDCE 132
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11793.1541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7Z7_9PHAE2.320e-19591.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0R4_ECTSI6.010e-5196.21EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11793contigEcto-sp13_S_contig11793:1643..3571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11793.1541.1mRNA_Ecto-sp13_S_contig11793.1541.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11793 1622..4257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11793.1541.1 ID=prot_Ecto-sp13_S_contig11793.1541.1|Name=mRNA_Ecto-sp13_S_contig11793.1541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=643bp
MKGPRCVVEGCESVASRAPPGGTAGVVCIQHSQPGMVNLVNWTQCSGSNC
GKYPTYGVEGTSNREYCREHALSGMVDVHRKKCVVENCPTRASHGVKGSG
KRQYCAMHAAEGMSDVGQKLCRFSSQEEGDCESIARYGVRGSKKREFCSQ
HSPEWMVNLNDKLCLFGDCFRLPTYGQRGTKVRQYCSQHAPSGTVNVTHR
LCAEPSCTSQPTYGNPGSRKREFCRRHALEGMTDLAHKTCAHAGCKKHPK
YGVQGSNRREFCSQHAKRGMVHLGNKKCMQRGCQLRPDHGNPGTKKPEFC
SQHKKQGMVKVADVVSAAPLAPDSTQITEKRNMKPNPSERPVDLKRVKRN
PEGIELPGFSLSGDAPAVTPATGRLDLRAVAATPAVLTTFSSTAASGASS
AAAVAAAAAAAAAAAVAAARGVAMTTVAVGGLETAGRARVLEAAPRGATG
DTKSAMTFQFFPGSSGGSTGLTVGLRTAQQGGLGASRAGQGSGEVSVVHN
GGIVAGAVADYQGKHGGGVAPAAFRGQGADGTGNVAASHGVARGAVGATS
LGNNSGFSALHGQAGGGEAGSSASVFPPGASEIPVHGGAMGRGGEGGGAA
AAIGVLPSSQPPGGDGGEAMRPAAEGDVDGGVVVPHRTGVSV*
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