prot_Ecto-sp13_S_contig11754.1509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11754.1509.1
Unique Nameprot_Ecto-sp13_S_contig11754.1509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: D7G6C8_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C8_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.510e-55
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELK LNPGFPILLREGTGADPYLLATYD+GVEHRLSLSGLSQENIAKEV
Sbjct:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKALNPGFPILLREGTGADPYLLATYDYGVEHRLSLSGLSQENIAKEV 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: I1IWN0_BRADI (L51_S25_CI-B8 domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IWN0_BRADI)

HSP 1 Score: 100 bits (249), Expect = 8.160e-26
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEVRGFA 90
            MAWRASLSR+V+E+RF  C  S + AP REF + NYA++KT NP  P L+RE +G +P L A YD GVE  +SL GL++  I K++   A
Sbjct:    1 MAWRASLSRSVKEIRFLFCQSSPASAPAREFVKKNYADIKTSNPSLPFLVRECSGVEPQLWARYDMGVERCVSLGGLTEAQIDKKLEDLA 90          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A0D6R4M3_ARACU (L51_S25_CI-B8 domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R4M3_ARACU)

HSP 1 Score: 99.8 bits (247), Expect = 2.120e-25
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWRA LSRN++ELR   C +S S A  R+F R+NY +LKTLNP FPIL+RE +G +P + A Y +G+E  ++L GL++  I K+V
Sbjct:    1 MAWRAQLSRNLKELRIHLCQVSPSSAATRDFIRSNYKDLKTLNPKFPILIRECSGIEPRIWARYQYGIEKSVALDGLTEGQITKKV 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A453BS07_AEGTS (L51_S25_CI-B8 domain-containing protein n=7 Tax=Triticeae TaxID=147389 RepID=A0A453BS07_AEGTS)

HSP 1 Score: 97.1 bits (240), Expect = 1.910e-24
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEVRGFA 90
            MAWRASLSRNV+E+RF  C  S +  P REF + NY ++KT NP  P+L+RE +G  P L A YD GVE  + L GL++  I K++   A
Sbjct:    1 MAWRASLSRNVKEIRFLFCQSSPASGPAREFVKKNYGDIKTRNPTLPVLIRECSGVQPQLWARYDMGVERCVRLDGLTEAQIDKKLEELA 90          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: W1PFD0_AMBTC (L51_S25_CI-B8 domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PFD0_AMBTC)

HSP 1 Score: 97.1 bits (240), Expect = 2.200e-24
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWR  LSRN++ELR   C  S + A  REF + NY +LKTLNP FPIL+RE +G +P L A YDFGVE  + L GL++  I K++
Sbjct:    1 MAWRGHLSRNLKELRVLFCQTSPASASTREFVQRNYTDLKTLNPTFPILVRECSGVEPQLWARYDFGVERCVRLEGLTETQITKKL 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A3S3MVY3_9MAGN (NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MVY3_9MAGN)

HSP 1 Score: 97.1 bits (240), Expect = 2.200e-24
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWR  LSRN++ELRF  C  S + A  REF   NY +LKTLNP FPIL+RE +G DP + A YD GVE  + L GL++  I++++
Sbjct:    1 MAWRGHLSRNLKELRFLFCQTSPASAQAREFVHRNYKDLKTLNPKFPILIRECSGVDPQIWARYDMGVERCVHLDGLTEAQISRKL 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A5J5APT5_9ASTE (L51_S25_CI-B8 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5APT5_9ASTE)

HSP 1 Score: 95.9 bits (237), Expect = 6.290e-24
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWR  LSRN++ELR C C  S + +  R F   NY +LKTLNP FPIL+RE  G +P L A YD GVE  + L GL++  I+K V
Sbjct:    1 MAWRGHLSRNLKELRICFCQTSPASSSARAFIERNYKDLKTLNPKFPILIRECNGIEPQLWARYDMGVERGIRLEGLTEVQISKAV 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A0A0LDA2_CUCSA (L51_S25_CI-B8 domain-containing protein n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LDA2_CUCSA)

HSP 1 Score: 95.1 bits (235), Expect = 1.170e-23
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEV 86
            MAWR  LS+N++ELR   C  S S AP R F   NY +LKTLNP FPIL+RE +G +P L A YD G+E    L GLS+  I+K +
Sbjct:    1 MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKAL 86          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: UPI0001982B0E (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=2 Tax=Vitis TaxID=3603 RepID=UPI0001982B0E)

HSP 1 Score: 95.1 bits (235), Expect = 1.270e-23
Identity = 46/90 (51.11%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEVRGFA 90
            MAWR  LSRN++ELR   C  S + +  R F   NY +LKTLNP FPIL+RE  G  P L A YD GVE  + L GL++E I+K V   A
Sbjct:    1 MAWRGQLSRNLKELRILFCQTSPASSSARAFVERNYKDLKTLNPKFPILIRECNGTRPQLWARYDMGVERGIHLEGLTEEQISKAVEDLA 90          
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Match: A0A6P5ZTD2_DURZI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZTD2_DURZI)

HSP 1 Score: 94.7 bits (234), Expect = 1.800e-23
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILLREGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEVR 87
            MAWR+ LSRN++ELR   C  S S AP R F   NY +LKTLNP FPIL+RE +G +P + A YD GVE  + L G ++  I K ++
Sbjct:    1 MAWRSQLSRNLKELRILLCQTSPSSAPARLFVENNYKDLKTLNPKFPILIRECSGIEPQMWARYDMGVERGIRLEGFTEPQILKALQ 87          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11754.1509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C8_ECTSI1.510e-5597.67L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
I1IWN0_BRADI8.160e-2652.22L51_S25_CI-B8 domain-containing protein n=1 Tax=Br... [more]
A0A0D6R4M3_ARACU2.120e-2552.33L51_S25_CI-B8 domain-containing protein n=2 Tax=Ar... [more]
A0A453BS07_AEGTS1.910e-2450.00L51_S25_CI-B8 domain-containing protein n=7 Tax=Tr... [more]
W1PFD0_AMBTC2.200e-2453.49L51_S25_CI-B8 domain-containing protein n=1 Tax=Am... [more]
A0A3S3MVY3_9MAGN2.200e-2452.33NADH dehydrogenase ubiquinone 1 alpha subcomplex s... [more]
A0A5J5APT5_9ASTE6.290e-2452.33L51_S25_CI-B8 domain-containing protein n=1 Tax=Ny... [more]
A0A0A0LDA2_CUCSA1.170e-2352.33L51_S25_CI-B8 domain-containing protein n=10 Tax=C... [more]
UPI0001982B0E1.270e-2351.11NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A6P5ZTD2_DURZI1.800e-2350.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..91
e-value: 3.7E-13
score: 59.7
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 28..78
e-value: 1.5E-10
score: 40.8
NoneNo IPR availableGENE3D3.40.30.10coord: 2..91
e-value: 3.0E-24
score: 87.0
NoneNo IPR availablePANTHERPTHR12878:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 2coord: 1..86
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PIRSFPIRSF005822NDUA2coord: 1..91
e-value: 5.4E-27
score: 90.8
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..86
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11754contigEcto-sp13_S_contig11754:1246..1911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11754.1509.1mRNA_Ecto-sp13_S_contig11754.1509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11754 1246..2173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11754.1509.1 ID=prot_Ecto-sp13_S_contig11754.1509.1|Name=mRNA_Ecto-sp13_S_contig11754.1509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKTLNPGFPILL
REGTGADPYLLATYDFGVEHRLSLSGLSQENIAKEVRGFAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR016464NADH_Ub_cplx-1_asu_su-2
IPR036249Thioredoxin-like_sf