prot_Ecto-sp13_S_contig1174.1498.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1174.1498.1
Unique Nameprot_Ecto-sp13_S_contig1174.1498.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length261
Homology
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: D7G9D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D5_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.840e-29
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0
Query:  107 MPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLA 165
            MPWLAVPYGET ATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLA
Sbjct:    1 MPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLA 59          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A843U7U9_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U7U9_COLES)

HSP 1 Score: 72.0 bits (175), Expect = 1.120e-10
Identity = 52/128 (40.62%), Postives = 62/128 (48.44%), Query Frame = 0
Query:   23 QVTSASLHGKRTVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLT 147
            QV   +L GK TV + FSA WC   R     LA  Y     +    FE                    VVFVS+DR+  +F  Y   MPWLAVP+ +T A ARL    KVRG P L V DG+TG +LT
Sbjct:   68 QVEVDNLEGK-TVAIYFSAHWCGPCRRFTPNLAEAYSELAPK---GFE--------------------VVFVSSDREEDSFGGYFSEMPWLAVPFSDTDARARLKSLFKVRGIPHLVVLDGSTGRVLT 171          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: B4ZFY3_AMPCA (Nucleoredoxin (Fragment) n=1 Tax=Amphidinium carterae TaxID=2961 RepID=B4ZFY3_AMPCA)

HSP 1 Score: 67.0 bits (162), Expect = 1.750e-9
Identity = 44/128 (34.38%), Postives = 60/128 (46.88%), Query Frame = 0
Query:   15 LLDTTGTLQVTSASLHGKRTVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFD 139
            LL  + +   T+ +L GK  V + FSA WC   RG   +LA +Y   L+                           VVFVS+D++ +AF  Y   MPWLA+PY E    A L+   KV+G PSL + D
Sbjct:    5 LLAASASKVSTATALAGKSAVALYFSAHWCPPCRGFTPQLAEWYKNSLK----------------------AKGLEVVFVSSDKEEKAFNEYHAEMPWLALPYTERELKATLSKKFKVQGIPSLVILD 110          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A3S3MNA2_9MAGN (Putative nucleoredoxin 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MNA2_9MAGN)

HSP 1 Score: 65.1 bits (157), Expect = 1.820e-8
Identity = 52/147 (35.37%), Postives = 69/147 (46.94%), Query Frame = 0
Query:   20 GTLQVTSASLHGKRTVGVLFSARWCRGLGSKLALFYHACLQR-DQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLA 165
            G +QV  A L G+  VG+ FSA WC         F  A  +   +  FEA                    VFVS D+D  +F+ Y   MPWLA+P+ ++T   RL    KVRG P L VF G  G+LL+  G A + + G  A P +
Sbjct:   57 GNIQVKIADLVGE-IVGIYFSASWCGPCQRFTPTFVEAYKELYAKGDFEA--------------------VFVSTDKDEESFKEYFAKMPWLAIPFSDSTTRRRLNDLFKVRGIPHL-VFLGGNGKLLSNGGVALIKEYGVEAYPFS 181          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A6T0B168_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B168_CHRCT)

HSP 1 Score: 65.1 bits (157), Expect = 1.940e-8
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   13 RALLDTTGTLQVTSASLHGKRTVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSD 156
            ++L   +G L  T  +L GK  VG+ FSA WC   RG    L   Y   ++    AFE                    +VFVS+D+D  AF  Y   MPWLAVP+ +  A ARL+   KV+G P+L + D  +G ++TA G   VS+
Sbjct:    8 KSLTSASGELS-TDDALKGK-IVGLYFSAHWCPPCRGFTPALVETYKK-IKTAGKAFE--------------------IVFVSSDKDQGAFDEYFGEMPWLAVPFSDREAKARLSKKYKVQGIPTLVILD-ESGAIITADGREAVSE 130          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A0M0K094_9EUKA (Nucleoredoxin 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K094_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 4.830e-8
Identity = 49/147 (33.33%), Postives = 66/147 (44.90%), Query Frame = 0
Query:   15 LLDTTGTLQVTSASLHGKRTVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADV-SDP 157
            L  T G  Q         + +G+ FSA WC   RG    L   Y       +D  +A+                  ++FVS+DRD +AF  Y   MPWLA+P G+T   A+L+    V G P+  + D ATGE +T  G   V SDP
Sbjct:  154 LSGTEGETQSLDDIKRYAKVIGMYFSAHWCPPCRGFTPSLVSAY-------KDHLKAKG---------------LEIIFVSSDRDQKAFLEYYGSMPWLAIPQGDTR-KAKLSKLFSVDGIPAFVLIDAATGETITTEGRGAVGSDP 277          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A0E0NWC3_ORYRU (Uncharacterized protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0NWC3_ORYRU)

HSP 1 Score: 63.9 bits (154), Expect = 5.760e-8
Identity = 46/130 (35.38%), Postives = 58/130 (44.62%), Query Frame = 0
Query:   34 TVGVLFSARWCRGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADP 163
            TV + FSA WC             C +      EA      Q +R         +VFVS D D  AF AY   MPWLAVP+ ++ A A+L    KV G P L + D  +GE+ T  G   V + G  A P
Sbjct:   43 TVALYFSASWCP-----------PCRRFTPKLIEAYNELVSQGKRERA----LRIVFVSGDSDQDAFNAYFAKMPWLAVPFSDSEALAKLNERYKVMGIPHLVILDAKSGEIYTEDGVELVHEYGTEAYP 157          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A1X7VHN7_AMPQE (Thioredoxin domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VHN7_AMPQE)

HSP 1 Score: 61.6 bits (148), Expect = 6.290e-8
Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 0
Query:   35 VGVLFSARWCRGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLT 147
            VG+L+SA WC            AC++  +      E+     ++S        +VF+S DRD   F  + + MPWLAVPY +     +L+    V   P+L +FDG TG LLT
Sbjct:   66 VGLLYSAYWCP-----------ACIEFTKKVARWYEKI---QQKSALGKKTLEIVFISFDRDENEFNKHFDTMPWLAVPYEDKRVCNKLSQTFHVHSIPTLLLFDGKTGTLLT 164          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: A0A7J6VDZ7_THATH (Thioredoxin, nucleoredoxin n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VDZ7_THATH)

HSP 1 Score: 63.5 bits (153), Expect = 6.360e-8
Identity = 52/139 (37.41%), Postives = 69/139 (49.64%), Query Frame = 0
Query:   15 LLDTTGTLQVTSASLHGKRTVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALG 150
            LL    T QVT ASL GK TVG+ FSA WC        KL   YH          + R+ F    +++        +VFVS+DR   AF +Y + MPWLA+P+G++T    L     V+G P L +  G  G+ LT  G
Sbjct:  194 LLAHPTTKQVTVASLVGK-TVGLYFSAEWCLPCHKFTPKLISIYH----------KIRQMFIDDMDKNF------EIVFVSSDRTQGAFASYFDTMPWLALPFGDSTIK-NLMKYFDVQGIPCLVII-GPDGKTLTKQG 313          
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Match: NRX12_ORYSJ (Probable nucleoredoxin 1-2 n=8 Tax=Oryza TaxID=4527 RepID=NRX12_ORYSJ)

HSP 1 Score: 63.2 bits (152), Expect = 1.040e-7
Identity = 48/133 (36.09%), Postives = 62/133 (46.62%), Query Frame = 0
Query:   34 TVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAFRAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADP 163
            TV + FSA WC   R    KL   Y+  + + + +FE                    VVFVS D D  AF AY   MPWLAVP+ ++ A A+L    KV G P L + D  +GE+ T  G   V + G  A P
Sbjct:   43 TVALYFSASWCPPCRRFTPKLIEAYNELVSQGK-SFE--------------------VVFVSGDSDQDAFNAYFAKMPWLAVPFSDSEALAKLNERYKVMGIPHLVILDAKSGEIYTEDGVELVHEYGTEAYP 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1174.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D5_ECTSI5.840e-2998.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A843U7U9_COLES1.120e-1040.63Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
B4ZFY3_AMPCA1.750e-934.38Nucleoredoxin (Fragment) n=1 Tax=Amphidinium carte... [more]
A0A3S3MNA2_9MAGN1.820e-835.37Putative nucleoredoxin 1 n=1 Tax=Cinnamomum micran... [more]
A0A6T0B168_CHRCT1.940e-836.05Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0M0K094_9EUKA4.830e-833.33Nucleoredoxin 1 n=1 Tax=Chrysochromulina tobinii T... [more]
A0A0E0NWC3_ORYRU5.760e-835.38Uncharacterized protein n=2 Tax=Oryza TaxID=4527 R... [more]
A0A1X7VHN7_AMPQE6.290e-833.63Thioredoxin domain-containing protein n=1 Tax=Amph... [more]
A0A7J6VDZ7_THATH6.360e-837.41Thioredoxin, nucleoredoxin n=1 Tax=Thalictrum thal... [more]
NRX12_ORYSJ1.040e-736.09Probable nucleoredoxin 1-2 n=8 Tax=Oryza TaxID=452... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012336Thioredoxin-like foldPFAMPF13905Thioredoxin_8coord: 67..139
e-value: 5.8E-8
score: 33.0
NoneNo IPR availableGENE3D3.40.30.10coord: 13..161
e-value: 6.0E-14
score: 54.0
NoneNo IPR availablePANTHERPTHR13871THIOREDOXINcoord: 21..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 238..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..212
NoneNo IPR availableTMHMMTMhelixcoord: 215..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1174contigEcto-sp13_S_contig1174:11421..14668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1174.1498.1mRNA_Ecto-sp13_S_contig1174.1498.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1174 11326..14964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1174.1498.1 ID=prot_Ecto-sp13_S_contig1174.1498.1|Name=mRNA_Ecto-sp13_S_contig1174.1498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp
MRRKHWTHGIYPRALLDTTGTLQVTSASLHGKRTVGVLFSARWCRGLGSK
LALFYHACLQRDQDAFEARERFCFQDERSITPLSRASVVFVSNDRDARAF
RAYREGMPWLAVPYGETTATARLAGACKVRGTPSLAVFDGATGELLTALG
AADVSDPGALADPLAVIGRWCVLGEDEREDSRSPSAEGEAREKARPRSRA
SSSEVLLSSRAPAAWVLATVFIGAAAACGIAMTVTLYKPAPARTMELRRI
PPRGPACIKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold