prot_Ecto-sp13_S_contig11733.1494.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11733.1494.1
Unique Nameprot_Ecto-sp13_S_contig11733.1494.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: D7FU09_ECTSI (Photolyase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU09_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.080e-31
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFVQ 59
            GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALS FVQ
Sbjct:  368 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSGFVQ 425          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A6H5LA65_9PHAE (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA65_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 8.250e-30
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFVQ 59
            GPVLVTQGVKDPLNDA GRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALS FVQ
Sbjct:  635 GPVLVTQGVKDPLNDAGGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSGFVQ 692          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: I2CPL0_NANGC (Alpha beta hydrolase fold protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPL0_NANGC)

HSP 1 Score: 72.8 bits (177), Expect = 7.990e-14
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFV 58
            GPVLV QG+ DPLNDA GRA L +A    V VV ++GGHC H E   + CAA+++FV
Sbjct:  240 GPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGHCVHDERPQETCAAMAAFV 296          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A4D9CZF8_9STRA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.470e-13
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFV 58
            GPVLV QG+ DPLNDA GRA L +A    V VV ++GGHC H E   + CAA+++FV
Sbjct:  840 GPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGHCVHDERPRETCAAMAAFV 896          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A7S2UUB3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUB3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.660e-13
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFVQ 59
            GPVLVTQG+ DPLNDA GR  L +   P +    +  GHCPHHEV  +V  A+ +FV+
Sbjct:  280 GPVLVTQGILDPLNDAKGRLDLLKKCYPNLEACSIQAGHCPHHEVPKEVSQAIKAFVE 337          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A836C8C6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.260e-12
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFVQ 59
            GPVLV QG+ DPLNDA  R   F+     V VV + GGHCP  E+A +VCAA+++F +
Sbjct:  210 GPVLVAQGLLDPLNDAKARVKQFQEAYEAVEVVPIQGGHCPQDEMAEEVCAAIAAFTR 267          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: R7QBB6_CHOCR (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBB6_CHOCR)

HSP 1 Score: 65.1 bits (157), Expect = 7.610e-11
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    2 GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFV 58
            GP+LV QGV DPLNDA GRA   EA  P+ +VVR++ GHCPH E A     A+S ++
Sbjct:  923 GPLLVFQGVLDPLNDARGRADKIEAQYPRATVVRVNSGHCPHEEDAEAFVEAISRWM 979          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A835W7K4_CHLIN (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W7K4_CHLIN)

HSP 1 Score: 64.7 bits (156), Expect = 1.040e-10
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query:    1 QGPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFVQ 59
            +GP +V QG  DPLNDA+ RA     L P V VV L  GHCPH EV   V AAL  F++
Sbjct:  650 RGPAMVLQGALDPLNDAESRAKEMGQLCPNVQVVLLQAGHCPHDEVPEQVNAALLGFIR 708          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A7S1GQH1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQH1_CYCTE)

HSP 1 Score: 62.8 bits (151), Expect = 1.940e-10
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 QGPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSSFV 58
            +GPVLV QG+ DPLND+  RA L   L   ++V  ++GGHCPH E+  DV  A+  ++
Sbjct:  135 RGPVLVAQGMLDPLNDSPSRAKLLGGLRSDITVTPINGGHCPHDEMPHDVAKAIMDWM 192          
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Match: A0A7S1XLU4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.070e-10
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 QGPVLVTQGVKDPLNDADGRATLF---EALGPQVSVVRLD-GGHCPHHEVAADVCAALSSFVQ 59
            +GPV++ QG+ DPLNDA  RA  F   EA   QV +  L+ GGHCPHHEV   V AAL  F++
Sbjct:  147 KGPVVIVQGMSDPLNDARSRAKAFVNAEAYQNQVRLAALEKGGHCPHHEVPEKVNAALLDFLE 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11733.1494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU09_ECTSI2.080e-3198.28Photolyase 1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5LA65_9PHAE8.250e-3096.55Photolyase/cryptochrome alpha/beta domain-containi... [more]
I2CPL0_NANGC7.990e-1456.14Alpha beta hydrolase fold protein (Fragment) n=1 T... [more]
A0A4D9CZF8_9STRA1.470e-1356.14Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A7S2UUB3_9STRA7.660e-1351.72Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A836C8C6_9STRA5.260e-1251.72Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
R7QBB6_CHOCR7.610e-1154.39Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A835W7K4_CHLIN1.040e-1052.54Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A7S1GQH1_CYCTE1.940e-1046.55Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1XLU4_9STRA3.070e-1052.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 1..59
e-value: 1.5E-10
score: 43.1
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 2..58
NoneNo IPR availablePANTHERPTHR47832FAMILY NOT NAMEDcoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11733contigEcto-sp13_S_contig11733:608..1159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11733.1494.1mRNA_Ecto-sp13_S_contig11733.1494.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11733 608..1159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11733.1494.1 ID=prot_Ecto-sp13_S_contig11733.1494.1|Name=mRNA_Ecto-sp13_S_contig11733.1494.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
QGPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADV
CAALSSFVQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase