prot_Ecto-sp13_S_contig11722.1488.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11722.1488.1
Unique Nameprot_Ecto-sp13_S_contig11722.1488.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Match: D8LET7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET7_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 4.060e-113
Identity = 199/210 (94.76%), Postives = 202/210 (96.19%), Query Frame = 0
Query:    1 MSPCKSTACVALAAVITLIAGVSDAFVVPSASVLSASKSDSRAPGSSSSSSLSMGADGGTTRGKDLVFQTIATLLAGVTAAANFESANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLGALQRIVQDDGAGVVLEKAKLDE 210
            MSPCKSTACVALAAV TLIAGVSDAFVVPSASVL AS+S+SRAPGSSSSSSLSMGADGGTTRG D   QTIATLLAGVTAAANFESANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQE VEAAKLDLFQKNWSRAVSNCSKAKSAMSGN KAAILKAVGSSNEAGATKL+ADIDMGLGALQRIVQDDGAGVVLEKAKLDE
Sbjct:    1 MSPCKSTACVALAAVSTLIAGVSDAFVVPSASVLGASRSNSRAPGSSSSSSLSMGADGGTTRG-DFGKQTIATLLAGVTAAANFESANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEVVEAAKLDLFQKNWSRAVSNCSKAKSAMSGN-KAAILKAVGSSNEAGATKLMADIDMGLGALQRIVQDDGAGVVLEKAKLDE 208          
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Match: A0A836CBT3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.990e-16
Identity = 55/125 (44.00%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   87 ANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLGALQRIVQD-DGAGVVLEKAKLDE 210
            A AA+    S+T SGSRVNKDP SLL+ GLPI+CKP   LQEA+++ K D ++K+WSRA+++C +A   +S   K  +L AV  + +A   +L+  I   L  L+ I++  +G G V E+ KLD+
Sbjct:   43 AQAASGRGPSNTGSGSRVNKDPQSLLRQGLPINCKPVFDLQEAIDSVKYDTYRKDWSRALNDCKQAGGIVSKKRKD-LLAAVRPTEKAKGEQLLQTILDKLTPLEAILKSKEGTGTVAERIKLDD 166          
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Match: A0A6T5MD62_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MD62_HETAK)

HSP 1 Score: 75.9 bits (185), Expect = 1.630e-12
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   98 TASGSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLGALQRIVQD-DGAGVVLEKAKLDE 210
            T SG+RVNKDP SLL++GLPI+ K AR+LQ AVE  K D+  K W   ++   KA++ +    +A +LK V  S +A   K I ++   L  L++I+   +G G V E+ KLD+
Sbjct:   98 TGSGTRVNKDPESLLRYGLPINSKKARELQAAVEGVKSDILIKRWGAGIAGVQKARTVLG--KEAELLKEVRPSAQAEGKKAIQELKDLLDPLEQILASKEGTGTVQEREKLDK 209          
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Match: A0A7S2WU08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU08_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.140e-11
Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 0
Query:   98 TASGSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLG-ALQRIVQDDGAGVVLEKAKLD 209
            TA+GSRVNKDP SLL+ GLPI+ +P R+LQ A+E A+ DL  K  S ++ +  +A+  +  N   A+LK+V  S +  A +L+ +ID  L  A+  + +++G G + E+A LD
Sbjct:   14 TAAGSRVNKDPESLLRNGLPINNEPVRKLQVALETARNDLKVKRISASIGDVQQARGIIK-NQATALLKSVRPSAQERAKELLEEIDAALDPAITALKENNGQGSLQERAALD 125          
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Match: W7TQJ8_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQJ8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.350e-9
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   85 ESANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLGALQR-IVQDDGAGVVLEKAKLD 209
            +SA+AA      S+A GSRVNKD  SLL++GLPI+ K AR+LQEAVE  K ++  K  +    +  +AKS ++ + +  +LKAV    +  A +L+ +++  L  L     +D G G   E+AKLD
Sbjct:   96 QSAHAARPSNAPSSA-GSRVNKDAESLLRYGLPINSKEARELQEAVEGVKENIRGKRLNEGKKDVQRAKSILA-SKREKLLKAVRPDGKERAQELLKELEGNLDELTATFAEDAGRGSEQERAKLD 219          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11722.1488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LET7_ECTSI4.060e-11394.76Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A836CBT3_9STRA5.990e-1644.00Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A6T5MD62_HETAK1.630e-1242.11Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A7S2WU08_9STRA1.140e-1141.59Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7TQJ8_9STRA8.350e-939.68Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.78
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11722contigEcto-sp13_S_contig11722:198..4210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11722.1488.1mRNA_Ecto-sp13_S_contig11722.1488.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11722 198..4210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11722.1488.1 ID=prot_Ecto-sp13_S_contig11722.1488.1|Name=mRNA_Ecto-sp13_S_contig11722.1488.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MSPCKSTACVALAAVITLIAGVSDAFVVPSASVLSASKSDSRAPGSSSSS
SLSMGADGGTTRGKDLVFQTIATLLAGVTAAANFESANAANKLQVSSTAS
GSRVNKDPISLLQWGLPIDCKPARQLQEAVEAAKLDLFQKNWSRAVSNCS
KAKSAMSGNNKAAILKAVGSSNEAGATKLIADIDMGLGALQRIVQDDGAG
VVLEKAKLDE
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