prot_Ecto-sp13_S_contig11695.1470.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11695.1470.1
Unique Nameprot_Ecto-sp13_S_contig11695.1470.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 5.350e-16
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNN 112
            MA TDRD+L+AL+NATDG  WKNKT+W T+ADLS WHGV  +DQGRV +L+LS N
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSAN 55          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 9.930e-16
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            MASTDRD+L+AL+NAT+GA W+N  +WGTDADLSQW GV +N QGRV  L LS N+
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNN 56          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.320e-15
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            MASTDRD L+AL+NAT+G  W    +W T A LSQWHGV +NDQGRV  L L+ N+
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENN 56          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.280e-13
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   56 STMASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            STM  TDRD L+AL++A  G  WKN  +W  DADLS+WHG+ INDQGRV E+ L+ N+
Sbjct:   49 STMPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANN 106          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.960e-13
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            MA TDRD L+AL+ AT G  W+   +W TDADL  WHGV +NDQGRV +L L +N+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNN 56          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 5.530e-13
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            MA TDRD L+A++ AT G  W    +W TD+DL  WHGV +NDQGRV +L L  N+
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNN 56          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 7.920e-13
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   57 TMASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            TMA TDR  L+AL+NAT GA WKN  +W T A LSQWHGV +N QGRV +L+L  N+
Sbjct:   70 TMAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNN 126          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5KMQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ1_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 9.380e-13
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0
Query:   51 RHCNPSTMASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            R   P  M+S DR  L+ALF++TDGA WK K++W TDA L+ W GV +N  GRV  L+L NN+
Sbjct:   39 RRSRPEQMSSMDRAALIALFHSTDGANWKRKSNWNTDAGLASWEGVRLNHAGRVVGLSLPNNN 101          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5K1I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I9_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.650e-12
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   58 MASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNND 113
            M+S DR  L+ALF +TDGA WK K++W TDA L+ W GV +N  GRV EL+L NN+
Sbjct:   43 MSSIDRAALIALFRSTDGANWKWKSNWNTDAGLATWEGVSLNHAGRVVELSLPNNN 98          
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.220e-12
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:   56 STMASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGINDQGRVGELTLSNN 112
            S + STDRD L+AL++ATDGA WK+K +W TD  L +W GV  NDQGRV  L L +N
Sbjct:  106 SAIMSTDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDN 162          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11695.1470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKS5_ECTSI5.350e-1669.09LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI9.930e-1667.86LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JX36_9PHAE1.320e-1560.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL09_ECTSI1.280e-1358.62Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE1.960e-1357.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3C2_9PHAE5.530e-1353.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK2_ECTSI7.920e-1361.40Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KMQ1_9PHAE9.380e-1352.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1I9_9PHAE1.650e-1257.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8T5_9PHAE2.220e-1257.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 57..113
e-value: 2.2E-11
score: 44.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11695contigEcto-sp13_S_contig11695:1510..4176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11695.1470.1mRNA_Ecto-sp13_S_contig11695.1470.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11695 1509..4176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11695.1470.1 ID=prot_Ecto-sp13_S_contig11695.1470.1|Name=mRNA_Ecto-sp13_S_contig11695.1470.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
LHHTLQADPRRWIWTGTRGRSYRSVVFNVLAWWRARRVDTTVETRAYLFL
RHCNPSTMASTDRDLLLALFNATDGAFWKNKTSWGTDADLSQWHGVGIND
QGRVGELTLSNND
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf