prot_Ecto-sp13_S_contig1164.1421.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1164.1421.1
Unique Name	prot_Ecto-sp13_S_contig1164.1421.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	425

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 655 bits (1690), Expect = 1.560e-226
Identity = 369/388 (95.10%), Postives = 375/388 (96.65%), Query Frame = 0

Query:   36 TPEPLDEQPASSPCEGGDSSKATPALSPSTWKPNAAAAEWTPSFGAPAAPAAKTAEEEGVEQGTAEEDEVPTGEKDVGDTPESKATPSKDSAAVTGDNVAGKSDGATGAEATIRYDIAFLVSLRPKPEGTPRPEGLNPPDRVDILWDGKEPTPMKAGSMRGGGVRPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEEVLMKANAILNKMTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ 423
            TPEPLDEQPA S CEGGDSSKATPALSPSTWKPNAAAAEWTPSFGAPAAPAAK+  EEG EQGTAEE EVP GEKDVGDTPESKATPSKDSAA+TGD+VAGKSD ATG EATIRYDIAFLVSLRPKPEGTPRPEGLNPPDRVDILWDGKEPTPMKAGSMRGGG+RPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSL    KAEDKLPTE+VLMKANAILNKMTLEKFDKLSVTFMDVGLRDP+VVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ
Sbjct:   28 TPEPLDEQPAPSQCEGGDSSKATPALSPSTWKPNAAAAEWTPSFGAPAAPAAKSVGEEGDEQGTAEEGEVPAGEKDVGDTPESKATPSKDSAAITGDDVAGKSDAATGVEATIRYDIAFLVSLRPKPEGTPRPEGLNPPDRVDILWDGKEPTPMKAGSMRGGGIRPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSLETTGKAEDKLPTEKVLMKANAILNKMTLEKFDKLSVTFMDVGLRDPKVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ 415

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 496 bits (1278), Expect = 4.710e-165
Identity = 283/295 (95.93%), Postives = 286/295 (96.95%), Query Frame = 0

Query:  132 DNVAGKSDGATGAEATIRYDIAFLVSLRPKPEGTPRPEGLNPPDRVDILWDGKEPTPMKAGSMRGGGVRPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEEVLMKANAILNK---MTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ 423
            DN AGKSD  TG EATIRYDIAFLVSLRPKPE TPRPEGLNPPDRVDILWDGKEPTP+KAGSMRGGG+RPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSL AKDKAED+LPTEEVLMKANAILNK   MTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ
Sbjct:   91 DNAAGKSDEETGVEATIRYDIAFLVSLRPKPEATPRPEGLNPPDRVDILWDGKEPTPIKAGSMRGGGIRPLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDXXXXXXXXXXXXXXXXXXXXXXPPVDTAPALEDCKPIEINEATRWKPKSLKAKDKAEDELPTEEVLMKANAILNKARMMTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQ 385

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A7S4VDN4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDN4_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.120e-30
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 0

Query:  273 VDTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEE-VLMKANAILNKMTLEKFDKLSVTFMDVGL-RDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKD 414
            V+TAP LE+CKP+E+N+ TRWK      + K E+   ++  VL KA  ILNK++L KFDKLS  F++ G+ R+ E + G I +IV KAQ EPHFS+MYA LC ++ARTP  G+ E +  K +SK  KKF+KMLL + Q+EFE+D
Sbjct:  267 VETAPPLEECKPLEVNDDTRWKANVFDKEKKTEEDEQSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPS--KSSSKKGKKFKKMLLSRCQEEFEQD 408

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: K0RPP6_THAOC (MI domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPP6_THAOC)

HSP 1 Score: 133 bits (335), Expect = 5.150e-30
Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = 0

Query:  274 DTAPALEDCKPIEINEATRWKPKSL---GAKDKAEDKLPTEEVLMKANAILNKMTLEKFDKLSVTFMDVGL-RDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKD 414
            DTAPALEDCKP+E+N+ TRWK K     G  +  E     +E+L KA  ILNK++L KFDKLS  F+D G+ RD + ++G +++IV KAQ E HF+SMYA LC ++A TP+ G+ E       SK  KKF+K+LL + Q EFEKD
Sbjct:  278 DTAPALEDCKPLEVNDDTRWKAKVFKGEGGAESGEGDDGKDEILRKAMLILNKLSLTKFDKLSNAFIDCGIGRDIDCLTGAVEMIVTKAQEEQHFASMYASLCLKLASTPMEGMDE------GSKKGKKFKKILLERCQTEFEKD 416

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: B8BXR3_THAPS (Eukaryotic translation initiation factor eIF4G (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXR3_THAPS)

HSP 1 Score: 127 bits (319), Expect = 6.480e-30
Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 0

Query:  272 PVDTAPALEDCKPIEINEATRWKPKSLGAKDK-----AEDKLPTEEVLMKANAILNKMTLEKFDKLSVTFMDVGL-RDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFE 412
            P DTAP LEDCKPIE+NE TRWK K    K+       E +   EEV+ KA  ILNK++L KFDKLS  F++ G+ RD E ++  + +IV KAQ E HFSSMYA LC ++A TP  G+ +D+      K  KKF+K+LL + Q EFE
Sbjct:   12 PNDTAPLLEDCKPIEVNEETRWKAKVFEGKEGEAAAVTEGEDSKEEVIRKALLILNKLSLTKFDKLSDEFINCGIGRDVECLTEAVSLIVNKAQEEQHFSSMYAGLCLKLAGTPFEGIDDDS-----GKKGKKFKKILLQRCQDEFE 153

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A7S4S9Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9Z9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 7.040e-30
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 0

Query:  273 VDTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEE-VLMKANAILNKMTLEKFDKLSVTFMDVGL-RDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKD 414
            V+TAP LE+CKP+E+N+ TRWK      + K E+   ++  VL KA  ILNK++L KFDKLS  F++ G+ R+ E + G I +IV KAQ EPHFS+MYA LC ++ARTP  G+ E +  K +SK  KKF+KMLL + Q+EFE+D
Sbjct:  267 VETAPPLEECKPLEVNDDTRWKANVFDKEKKTEEDEQSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPS--KSSSKKGKKFKKMLLSRCQEEFEQD 408

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A7S2KXG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KXG3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.410e-29
Identity = 72/148 (48.65%), Postives = 99/148 (66.89%), Query Frame = 0

Query:  272 PVDTAPALEDCKPIEINEATRWKPKSL----GAKDKAEDKLPTEEVLMKANAILNKMTLEKFDKLSVTFMDVGL-RDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKD 414
            P DTAPALEDCKP+++NE TRWK K      G  D+ E     EE+L +A  ILNK++L KFDKLS  F++ G+ RD + ++G + +IV KAQ E HF+SMYA LC ++++TP+ G+ E       +K  KKF+K+LL + Q EFE D
Sbjct:  283 PNDTAPALEDCKPLQVNEETRWKAKVFVGKEGEADEDEAVESKEEILRRALLILNKLSLTKFDKLSDAFINCGIGRDIDCLTGAVGMIVNKAQEEQHFASMYAGLCLKMSKTPMEGIDE------GTKKGKKFKKILLERCQSEFETD 424

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A3R7G0R1_9STRA (MI domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G0R1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.870e-29
Identity = 71/140 (50.71%), Postives = 100/140 (71.43%), Query Frame = 0

Query:  274 DTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEEVLMK-ANAILNKMTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFE 412
            DTAPALEDC P++INE TRWKP    +K + +D + T E  +K A AILNK+++EKFDKLS   ++V +R  EV+ GVI++++ KAQME HFS+MYA+LCA+IA+T +  + +D   +      K FRK+LL + Q+EFE
Sbjct:  328 DTAPALEDCAPLDINEETRWKPSH--SKSRLDDPVETTEASLKEAKAILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTDMPAITQD-DNEVTQDTHKLFRKLLLQRCQKEFE 464

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: A0A225X0V3_9STRA (Eukaryotic translation initiation factor n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225X0V3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.530e-28
Identity = 70/140 (50.00%), Postives = 101/140 (72.14%), Query Frame = 0

Query:  274 DTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEEVLMK-ANAILNKMTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFE 412
            DTAPALEDC P+EINE TRWKP    +K + ++ + T E  +K A +ILNK+++EKFDKLS   +DV +R  EV+ GVI++++ KAQME HFS+MYA+LC++IA+T +  +  +  G+  +   K FRK+LL + Q+EFE
Sbjct:  286 DTAPALEDCAPLEINEETRWKPSH--SKSRLDEPVETSEASLKEAKSILNKLSIEKFDKLSDQLIDVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCSKIAQTAMPAITLEE-GEVVTDTHKLFRKLLLQRCQKEFE 422

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BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Match: W2Q3D8_PHYPN (MI domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2Q3D8_PHYPN)

HSP 1 Score: 127 bits (320), Expect = 4.580e-28
Identity = 70/140 (50.00%), Postives = 100/140 (71.43%), Query Frame = 0

Query:  274 DTAPALEDCKPIEINEATRWKPKSLGAKDKAEDKLPTEEVLMK-ANAILNKMTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFE 412
            DTAPALEDC P++INE TRWKP    AK + +D +   E  +K A +ILNK+++EKFDKLS   ++V +R  EV+ GVI++++ KAQME HFS+MYA+LCA+IA+T +  +  +  G+  +   K FRK+LL + Q+EFE
Sbjct:  286 DTAPALEDCAPLDINEETRWKPSH--AKSRLDDPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEE-GEVVTDTHKLFRKLLLQRCQKEFE 422

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1164.1421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKQ5_ECTSI	1.560e-226	95.10	Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus...	[more]
A0A6H5L9P4_9PHAE	4.710e-165	95.93	MI domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
A0A7S4VDN4_9STRA	3.120e-30	51.39	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
K0RPP6_THAOC	5.150e-30	51.03	MI domain-containing protein n=1 Tax=Thalassiosira...	[more]
B8BXR3_THAPS	6.480e-30	50.34	Eukaryotic translation initiation factor eIF4G (Fr...	[more]
A0A7S4S9Z9_9STRA	7.040e-30	51.39	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2KXG3_9STRA	7.410e-29	48.65	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]
A0A3R7G0R1_9STRA	7.870e-29	50.71	MI domain-containing protein n=4 Tax=Phytophthora ...	[more]
A0A225X0V3_9STRA	2.530e-28	50.00	Eukaryotic translation initiation factor n=3 Tax=P...	[more]
W2Q3D8_PHYPN	4.580e-28	50.00	MI domain-containing protein n=14 Tax=Phytophthora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 305..421 e-value: 3.7E-27 score: 97.0
IPR003890	MIF4G-like, type 3	PFAM	PF02854	MIF4G	coord: 317..415 e-value: 3.5E-14 score: 52.9
None	No IPR available	PANTHER	PTHR23253:SF9	EUKARYOTIC TRANSLATION INITIATION FACTOR 4G, ISOFORM B-RELATED	coord: 38..414
None	No IPR available	PANTHER	PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	coord: 38..414
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 17..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..424
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 29..33
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 306..419

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1164	contig	Ecto-sp13_S_contig1164:12699..18457 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1164.1421.1	mRNA_Ecto-sp13_S_contig1164.1421.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1164 10909..18457 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1164.1421.1 ID=prot_Ecto-sp13_S_contig1164.1421.1|Name=mRNA_Ecto-sp13_S_contig1164.1421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=425bp
MTETASSTTAKPTEAPAAAVAAVAAAGAAAAAASTTPEPLDEQPASSPCE
GGDSSKATPALSPSTWKPNAAAAEWTPSFGAPAAPAAKTAEEEGVEQGTA
EEDEVPTGEKDVGDTPESKATPSKDSAAVTGDNVAGKSDGATGAEATIRY
DIAFLVSLRPKPEGTPRPEGLNPPDRVDILWDGKEPTPMKAGSMRGGGVR
PLPPLGGRMGSSSRGLGEARGAPPPLRGAQRDMGRDRDNRMDQRGGRDDR
RSGGGGGGGGRDNRGGGGRRPPVDTAPALEDCKPIEINEATRWKPKSLGA
KDKAEDKLPTEEVLMKANAILNKMTLEKFDKLSVTFMDVGLRDPEVVSGV
IDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFR
KMLLVKVQQEFEKDWQGLFAAVQV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016021	MIF4-like_sf
IPR003890	MIF4G-like_typ-3
IPR016024	ARM-type_fold