prot_Ecto-sp13_S_contig1164.1419.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1164.1419.1
Unique Nameprot_Ecto-sp13_S_contig1164.1419.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length430
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1164.1419.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 7.620e-177
Identity = 391/432 (90.51%), Postives = 396/432 (91.67%), Query Frame = 0 
Query:    1 MCGELLSRESSGGRVSGTSTPLLSSSVSVSRDSPRGSAGSVEDFGTPATIGAADMNGGGGMDRPLLTRGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSG--GSVGNNNANEKSGNNNGAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYGHLSDEAVAAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXXVGAGQHPRGKAAGFXXXXXXXXXXXXXXXXSSPFEGFGLKEGVRANTGGGATTTSGAIAAVTGGVSRLGLGTTKSGXXXXNG-VSPSLSSAVGQVSGGLAXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAAS 429
            MCGELLSRESSGGRVSGTSTPLLSSSVSVS+DSPRGSAGSVEDFGTPATIGAADMNGGGGMDR LLTRGR XXXXXXXXXXXXXXXXXXXXXXXXXXXAG LHRGGMLGNMSGN    GGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSG  GSVGN+NANEK+GNNNGAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGY HLSDEA+AAMGAVYSSAARGNAPCDGVGLAA  XXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXSSPFEGFGLKEGVR N GGGA TT GAIAAVTGGVSRLGLGTT S XXXX   VSPSL+SAVGQVSGGL XXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAAS
Sbjct:  396 MCGELLSRESSGGRVSGTSTPLLSSSVSVSKDSPRGSAGSVEDFGTPATIGAADMNGGGGMDRQLLTRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVLHRGGMLGNMSGNXXXXGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSGNXGSVGNSNANEKNGNNNGAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYCHLSDEALAAMGAVYSSAARGNAPCDGVGLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPFEGFGLKEGVRGNMGGGAATTPGAIAAVTGGVSRLGLGTTMSXXXXXXXXVSPSLASAVGQVSGGLXXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAAS 827
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BLAST of mRNA_Ecto-sp13_S_contig1164.1419.1 vs. uniprot
Match: D8LKQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ3_ECTSI)

HSP 1 Score: 498 bits (1281), Expect = 2.620e-172
Identity = 378/429 (88.11%), Postives = 380/429 (88.58%), Query Frame = 0 
Query:    1 MCGELLSRESSGGRVSGTSTPLLSSSVSVSRDSPRGSAGSVEDFGTPATIGAADMNGGGGMDRPLLTRGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSGGSVGNNNANEKSGNNNGAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYGHLSDEAVAAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXXVGAGQHPRGKAAGFXXXXXXXXXXXXXXXXSSPFEGFGLKEGVRANTGGGATTTSGAIAAVTGGVSRLGLGTTKSGXXXXNGVSPSLSSAVGQVSGGLAXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAAS 429
            MCGELLSRESSGGR SGTSTPLLSSSVSVSRDSPRGSAGSVEDFG PATIGAADMNGGGGMDRPLLTRGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGN IRSGSGG                AAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGY HLSDEA AAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXX SSPFEGF L+EGVR N   GA TT GAIAAVTGGVSRL L TT S XXXXNGVSPSL+SAVG VSGGLAXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRV TTGGNMAAAS
Sbjct:    1 MCGELLSRESSGGRGSGTSTPLLSSSVSVSRDSPRGSAGSVEDFGAPATIGAADMNGGGGMDRPLLTRGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNSIRSGSGGXXXXXXXXXXXXXXXXAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYYHLSDEAAAAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXTSSPFEGFRLREGVRGNMSDGAATTPGAIAAVTGGVSRLVLDTTNSXXXXXNGVSPSLASAVGHVSGGLAXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVSTTGGNMAAAS 419
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1164.1419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8U0_9PHAE7.620e-17790.51KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LKQ3_ECTSI2.620e-17288.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1164contigEcto-sp13_S_contig1164:4003..5292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1164.1419.1mRNA_Ecto-sp13_S_contig1164.1419.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1164 3058..5292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1164.1419.1 ID=prot_Ecto-sp13_S_contig1164.1419.1|Name=mRNA_Ecto-sp13_S_contig1164.1419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=430bp
MCGELLSRESSGGRVSGTSTPLLSSSVSVSRDSPRGSAGSVEDFGTPATI
GAADMNGGGGMDRPLLTRGRSSSSSGIGGGGAAATVLDSGGGARSGGGAG
ALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDG
NGIRSGSGGSVGNNNANEKSGNNNGAAPPLRSPSTITGIEMEVGRSAFAR
LGERGLDDIKDLSGAGISAPESPEGYGHLSDEAVAAMGAVYSSAARGNAP
CDGVGLAAANAAAAAAATAAAAAAAAAAASNKAVGAGQHPRGKAAGFGRG
GSMSSGSSSSASTSSPFEGFGLKEGVRANTGGGATTTSGAIAAVTGGVSR
LGLGTTKSGGGGGNGVSPSLSSAVGQVSGGLAAGGGGGGGTAGPNSLKTV
KITGTAEEVQLAEYLIRVRTTGGNMAAAS*
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