prot_Ecto-sp13_S_contig1158.1375.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1158.1375.1
Unique Nameprot_Ecto-sp13_S_contig1158.1375.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1082
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: A0A6H5KJE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE5_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 8.690e-87
Identity = 158/176 (89.77%), Postives = 164/176 (93.18%), Query Frame = 0 
Query:  905 MLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHLEYSRQVKRNLRERKRFVLGEKRARRIAKTMDTKQLVEALRERGYETEGSEQLDQLRRLFIEDIQPEIRVRLHATSRWTKSRKKHRERTDTVEVGEIVARRQQLTSPKRVTPFSPSPFIRLNVRHAAT 1080
            MLRGSGEE+EEGN  LPEIDDRFLTVGQRLRRLRDARDNL+REK RAHLEYSRQVK NLRERKRFVL EKRA RIAK+MDTKQLVEAL+ERGY T+GSEQLDQLRR+FIE IQPEIRVRLHATSRWTKSR KHRERTDTVEVGEIVARRQQLTS KRVTPFSPSP  RLNVRHAAT
Sbjct:    1 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLEYSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATKGSEQLDQLRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQQLTSSKRVTPFSPSPITRLNVRHAAT 176
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: D7FZZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ8_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 1.340e-84
Identity = 176/311 (56.59%), Postives = 192/311 (61.74%), Query Frame = 0 
Query:  650 GDDIGHGLVLPGSNDAATRARIAPSVRSTADNTRLQGKLSSDDLSSSNEGTQALVVGAPGLRG-----GARVHIPNVADDGGIYATSGDAKSGDGSQEQHARPASAIRGKARSWRGGGGAGTEGAIPLHVDEAMVEADPTFDATGDKTPNDKISTSPFAHTKSPMVAEEVQRLSQAYSEANQEHLNAVARQESPHVKRALALIRDHGDIIRLKKKKKPEADIHRDKLVQGRPRSKRRPLGETPLLGMQLNGGIALGAEIAMLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHLEY 955
            GDD+GHG+VLPGSN+AATRAR APSVRSTADNTRL GKLS DDLSSS+E   A+  G PGLRG     G  VHIPNV  DGGI    G AK+GDG QEQHAR ASA RG+ +S R   GAGT+  IPLH DEAMV ADP  +ATGD TPN KIST+ FAHTKSPM AEEVQRLS+AYSEA QE+LNAV                                                                           GSGEE+EEGN  LPEIDDRFLTVGQRLRRLRDARDNLQREKHRAH++Y
Sbjct:    2 GDDMGHGIVLPGSNEAATRARTAPSVRSTADNTRLHGKLSYDDLSSSSERAPAVTEGTPGLRGDACRDGPGVHIPNVTGDGGIDPKGGGAKNGDGRQEQHARRASAERGETQSGRREEGAGTDRVIPLHTDEAMVGADPISEATGDTTPNHKISTNAFAHTKSPMEAEEVQRLSEAYSEATQEYLNAV---------------------------------------------------------------------------GSGEEDEEGNRILPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHMKY 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJE5_9PHAE8.690e-8789.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZZ8_ECTSI1.340e-8456.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 934..954
NoneNo IPR availableCOILSCoilCoilcoord: 460..480
NoneNo IPR availableCOILSCoilCoilcoord: 505..539

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1158contigEcto-sp13_S_contig1158:1505..10676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1158.1375.1mRNA_Ecto-sp13_S_contig1158.1375.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1158 96..10676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1158.1375.1 ID=prot_Ecto-sp13_S_contig1158.1375.1|Name=mRNA_Ecto-sp13_S_contig1158.1375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1082bp
MVHTIVLRACGLSREQVLAIQANTSPQIKSVGKTSRQEERKDEACSEEGA
GGGSKNKQHPWREEKRLGFRAACLRDWLLDAARVQGMRYPRPLSPDPNDT
TALVVPACGGCNGHDSVALVASDYPNSLRTGEGSTYGENRDRSLVEPQLW
SSVMALGRLVASCESGMSLLRRMGKANHIAGNGSTSDYSGWHTKRLSQGL
ETKYKMRCDGGILRQESLDACAVITDEARSPLRQNSLTERGRVSETKRRS
ASKPTLSPPTSSRESCSRGVKETSILETRASLQRDHSSESLPSAGSDDGG
LRHDVFENQSGPPGRSSKSETDFSVLLGAPGRHEGGKGEDGFRERNVHDG
DARAEGQDEWARGETIHSLCGGGSTLIRAADLEAAAEEGRRLGLLAAAKC
LDMDEKEAALSRERQSLRRQREGFRGRTHAEVSSLEASLANARDLRKAAG
DSMRRLEPIARAARNSERAVEAELRGQQQEIETITYSFVHQVELERDLQE
RADHAEEMGNELRGARGRLEAAERRIDELEAEGQGLRSRFGVYDTMFGKT
TADISSAMAVVVAKRNALRRTKKTVVALASKLQKLAEIATDEEALRAVVP
AGSDRRDLDLQVAEAVRITSEAARETEQTKLRRDEAAVAFEKARLKLSSG
DDIGHGLVLPGSNDAATRARIAPSVRSTADNTRLQGKLSSDDLSSSNEGT
QALVVGAPGLRGGARVHIPNVADDGGIYATSGDAKSGDGSQEQHARPASA
IRGKARSWRGGGGAGTEGAIPLHVDEAMVEADPTFDATGDKTPNDKISTS
PFAHTKSPMVAEEVQRLSQAYSEANQEHLNAVARQESPHVKRALALIRDH
GDIIRLKKKKKPEADIHRDKLVQGRPRSKRRPLGETPLLGMQLNGGIALG
AEIAMLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHR
AHLEYSRQVKRNLRERKRFVLGEKRARRIAKTMDTKQLVEALRERGYETE
GSEQLDQLRRLFIEDIQPEIRVRLHATSRWTKSRKKHRERTDTVEVGEIV
ARRQQLTSPKRVTPFSPSPFIRLNVRHAATA*
back to top