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Homology
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: D7FZZ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ9_ECTSI) HSP 1 Score: 314 bits (804), Expect = 2.690e-90 Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 3
Query: 273 LSIATYLSQPGCPLRSLSLAGCLDVDPAAWKTIYVRGKEGMRWDPPRPGDDGAVSLASALMSPHGCPLRRLGMANAGMKTIGAKAIATALCANRTLETVDLSGNDFGSTTDASAWESAADLLSFGLQASGRACCCGCQHRNTRRWARSSGCRCRSSLHCTSLRGLIVITGNSKST 797
LS+A YLSQ GCPLRSLSLAGCLDVDPAAWKTI VRGKEGMRWDPPRPGDDGAVSLA+AL+SPHGCPLRRL MANAGMKTIGAKAIATALCANRTLETVD+SGNDFGSTTDASAWESAADLLSFGLQASGRAC GCQH TRRW RSS CRC SSLHCTSL+GLIVIT NSKST
Sbjct: 373 LSLAIYLSQQGCPLRSLSLAGCLDVDPAAWKTINVRGKEGMRWDPPRPGDDGAVSLAAALISPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDASAWESAADLLSFGLQASGRACYGGCQHGKTRRWTRSSDCRCSSSLHCTSLQGLIVITDNSKST 547
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: A0A6H5KJE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE5_9PHAE) HSP 1 Score: 286 bits (733), Expect = 1.030e-85 Identity = 158/176 (89.77%), Postives = 164/176 (93.18%), Query Frame = 1
Query: 3664 MLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHLEYSRQVKRNLRERKRFVLGEKRARRIAKTMDTKQLVEALRERGYETEGSEQLDQLRRLFIEDIQPEIRVRLHATSRWTKSRKKHRERTDTVEVGEIVARRQQLTSPKRVTPFSPSPFIRLNVRHAAT 4191
MLRGSGEE+EEGN LPEIDDRFLTVGQRLRRLRDARDNL+REK RAHLEYSRQVK NLRERKRFVL EKRA RIAK+MDTKQLVEAL+ERGY T+GSEQLDQLRR+FIE IQPEIRVRLHATSRWTKSR KHRERTDTVEVGEIVARRQQLTS KRVTPFSPSP RLNVRHAAT
Sbjct: 1 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLEYSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATKGSEQLDQLRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQQLTSSKRVTPFSPSPITRLNVRHAAT 176
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: D7FZZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ8_ECTSI) HSP 1 Score: 283 bits (724), Expect = 1.430e-83 Identity = 176/311 (56.59%), Postives = 192/311 (61.74%), Query Frame = 1
Query: 2899 GDDIGHGLVLPGSNDAATRARIAPSVRSTADNTRLQGKLSSDDLSSSNEGTQALVVGAPGLRG-----GARVHIPNVADDGGIYATSGDAKSGDGSQEQHARPASAIRGKARSWRGGGGAGTEGAIPLHVDEAMVEADPTFDATGDKTPNDKISTSPFAHTKSPMVAEEVQRLSQAYSEANQEHLNAVARQESPHVKRALALIRDHGDIIRLKKKKKPEADIHRDKLVQGRPRSKRRPLGETPLLGMQLNGGIALGAEIAMLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHLEY 3816
GDD+GHG+VLPGSN+AATRAR APSVRSTADNTRL GKLS DDLSSS+E A+ G PGLRG G VHIPNV DGGI G AK+GDG QEQHAR ASA RG+ +S R GAGT+ IPLH DEAMV ADP +ATGD TPN KIST+ FAHTKSPM AEEVQRLS+AYSEA QE+LNAV GSGEE+EEGN LPEIDDRFLTVGQRLRRLRDARDNLQREKHRAH++Y
Sbjct: 2 GDDMGHGIVLPGSNEAATRARTAPSVRSTADNTRLHGKLSYDDLSSSSERAPAVTEGTPGLRGDACRDGPGVHIPNVTGDGGIDPKGGGAKNGDGRQEQHARRASAERGETQSGRREEGAGTDRVIPLHTDEAMVGADPISEATGDTTPNHKISTNAFAHTKSPMEAEEVQRLSEAYSEATQEYLNAV---------------------------------------------------------------------------GSGEEDEEGNRILPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHMKY 237
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: A0A836CKC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.170e-9 Identity = 62/207 (29.95%), Postives = 85/207 (41.06%), Query Frame = 3
Query: 81 CGMHDYEYTSPNVIHRPRLMIVLSSIPFSQITDVGCHRLANALDPLKVLSTLDLCHNPFGDKGCLSIATYLSQPGCPLR-----------------------------SLSLAGCLDVDPAAWKTIYVRGKE---------GMRWDPPRPGDDGAVSLASALMSPHGCPLRRLGMANAGMKTIGAKAIATALCANRTLETVDLSGND 587
C E P+++ R I+ +++P T G LA AL + L L L N GD G ++A + P L +LSL G + + +Y G PGD+GAV LA+AL+SPHGC L+RL + NA + G +AIA AL LE +DLSGND
Sbjct: 235 CAEPAVEAALPHLLRRTACTIIPAAVP---ATVAGAAALAAALRHARALRALHLASNSVGDAGARALAAAAAAPHPTLAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLGGAV----TSLVGVYQAGGSTAAXXXXXXXXXXXXXXPGDEGAVCLAAALLSPHGCALQRLRLVNARLGAAGVRAIAAALHCRSALEELDLSGND 434
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: A0A6H5K6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y7_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.600e-8 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = -2
Query: 3 DHVRGGVLVVVHAAVVRPLTSHPYKAGTEHAGFLPDRTLT 122
+ V GGVL+VVHA VVRPLTSHPY+AGTEHAGF D+ LT
Sbjct: 180 EGVGGGVLIVVHAVVVRPLTSHPYEAGTEHAGFSADQALT 219
BLAST of mRNA_Ecto-sp13_S_contig1158.1375.1 vs. uniprot
Match: A0A6H5J7U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U0_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 6.580e-6 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = -2
Query: 3 GGVLVVVHAAVVRPLTSHPYKAGTEHAGFLPDRTLT 110
GGVL+VVHA V+RPLTSHP KAGTEHAGF D+ LT
Sbjct: 383 GGVLIVVHAVVMRPLTSHPCKAGTEHAGFSLDQALT 418
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 4197 |
| Hectar predicted targeting category | other localisation |
| Exons | 15 |
| Ec32 ortholog description | Hypothetical leucine rich repeat protein |
| Ec32 ortholog | Ec-22_003480.1 |
| Cds size | 3246 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462608.2243235-UTR-Ecto-sp13_S_contig1158:95..573 | 1681462608.2243235-UTR-Ecto-sp13_S_contig1158:95..573 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1158 96..573 + |
| 1681462608.2340639-UTR-Ecto-sp13_S_contig1158:1031..1504 | 1681462608.2340639-UTR-Ecto-sp13_S_contig1158:1031..1504 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1158 1032..1504 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462608.2424426-CDS-Ecto-sp13_S_contig1158:1504..1752 | 1681462608.2424426-CDS-Ecto-sp13_S_contig1158:1504..1752 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 1505..1752 + |
| 1681462608.25147-CDS-Ecto-sp13_S_contig1158:1967..2954 | 1681462608.25147-CDS-Ecto-sp13_S_contig1158:1967..2954 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 1968..2954 + |
| 1681462608.267248-CDS-Ecto-sp13_S_contig1158:3615..3785 | 1681462608.267248-CDS-Ecto-sp13_S_contig1158:3615..3785 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 3616..3785 + |
| 1681462608.275379-CDS-Ecto-sp13_S_contig1158:4641..4807 | 1681462608.275379-CDS-Ecto-sp13_S_contig1158:4641..4807 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 4642..4807 + |
| 1681462608.283195-CDS-Ecto-sp13_S_contig1158:5178..5421 | 1681462608.283195-CDS-Ecto-sp13_S_contig1158:5178..5421 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 5179..5421 + |
| 1681462608.2913353-CDS-Ecto-sp13_S_contig1158:5979..6111 | 1681462608.2913353-CDS-Ecto-sp13_S_contig1158:5979..6111 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 5980..6111 + |
| 1681462608.3019626-CDS-Ecto-sp13_S_contig1158:6311..6688 | 1681462608.3019626-CDS-Ecto-sp13_S_contig1158:6311..6688 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 6312..6688 + |
| 1681462608.3098598-CDS-Ecto-sp13_S_contig1158:7120..7233 | 1681462608.3098598-CDS-Ecto-sp13_S_contig1158:7120..7233 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 7121..7233 + |
| 1681462608.3175426-CDS-Ecto-sp13_S_contig1158:7580..7640 | 1681462608.3175426-CDS-Ecto-sp13_S_contig1158:7580..7640 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 7581..7640 + |
| 1681462608.3258095-CDS-Ecto-sp13_S_contig1158:8026..8120 | 1681462608.3258095-CDS-Ecto-sp13_S_contig1158:8026..8120 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 8027..8120 + |
| 1681462608.3344774-CDS-Ecto-sp13_S_contig1158:8742..8873 | 1681462608.3344774-CDS-Ecto-sp13_S_contig1158:8742..8873 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 8743..8873 + |
| 1681462608.3469136-CDS-Ecto-sp13_S_contig1158:9199..9345 | 1681462608.3469136-CDS-Ecto-sp13_S_contig1158:9199..9345 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 9200..9345 + |
| 1681462608.355919-CDS-Ecto-sp13_S_contig1158:9801..10020 | 1681462608.355919-CDS-Ecto-sp13_S_contig1158:9801..10020 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 9802..10020 + |
| 1681462608.366887-CDS-Ecto-sp13_S_contig1158:10516..10676 | 1681462608.366887-CDS-Ecto-sp13_S_contig1158:10516..10676 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1158 10517..10676 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1158.1375.1 >prot_Ecto-sp13_S_contig1158.1375.1 ID=prot_Ecto-sp13_S_contig1158.1375.1|Name=mRNA_Ecto-sp13_S_contig1158.1375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1082bp
MVHTIVLRACGLSREQVLAIQANTSPQIKSVGKTSRQEERKDEACSEEGA GGGSKNKQHPWREEKRLGFRAACLRDWLLDAARVQGMRYPRPLSPDPNDT TALVVPACGGCNGHDSVALVASDYPNSLRTGEGSTYGENRDRSLVEPQLW SSVMALGRLVASCESGMSLLRRMGKANHIAGNGSTSDYSGWHTKRLSQGL ETKYKMRCDGGILRQESLDACAVITDEARSPLRQNSLTERGRVSETKRRS ASKPTLSPPTSSRESCSRGVKETSILETRASLQRDHSSESLPSAGSDDGG LRHDVFENQSGPPGRSSKSETDFSVLLGAPGRHEGGKGEDGFRERNVHDG DARAEGQDEWARGETIHSLCGGGSTLIRAADLEAAAEEGRRLGLLAAAKC LDMDEKEAALSRERQSLRRQREGFRGRTHAEVSSLEASLANARDLRKAAG DSMRRLEPIARAARNSERAVEAELRGQQQEIETITYSFVHQVELERDLQE RADHAEEMGNELRGARGRLEAAERRIDELEAEGQGLRSRFGVYDTMFGKT TADISSAMAVVVAKRNALRRTKKTVVALASKLQKLAEIATDEEALRAVVP AGSDRRDLDLQVAEAVRITSEAARETEQTKLRRDEAAVAFEKARLKLSSG DDIGHGLVLPGSNDAATRARIAPSVRSTADNTRLQGKLSSDDLSSSNEGT QALVVGAPGLRGGARVHIPNVADDGGIYATSGDAKSGDGSQEQHARPASA IRGKARSWRGGGGAGTEGAIPLHVDEAMVEADPTFDATGDKTPNDKISTS PFAHTKSPMVAEEVQRLSQAYSEANQEHLNAVARQESPHVKRALALIRDH GDIIRLKKKKKPEADIHRDKLVQGRPRSKRRPLGETPLLGMQLNGGIALG AEIAMLRGSGEENEEGNSSLPEIDDRFLTVGQRLRRLRDARDNLQREKHR AHLEYSRQVKRNLRERKRFVLGEKRARRIAKTMDTKQLVEALRERGYETE GSEQLDQLRRLFIEDIQPEIRVRLHATSRWTKSRKKHRERTDTVEVGEIV ARRQQLTSPKRVTPFSPSPFIRLNVRHAATA* back to topmRNA from alignment at Ecto-sp13_S_contig1158:96..10676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1158.1375.1 ID=mRNA_Ecto-sp13_S_contig1158.1375.1|Name=mRNA_Ecto-sp13_S_contig1158.1375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10581bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1158:96..10676+ (Ectocarpus species13 EcNAP12_S_4_19m) GATGTGAGAGTCCGGTCCGGTAAGAACCCGGCATGCTCCGTCCCGGCTTT
GTAGGGATGCGAGGTCAATGGTCGAACGACTGCGGCATGCACGACTACGA
GTACACCTCCCCTAACGTGATCCACCGCCCACGTCTAATGATTGTCCTTT
CATCAATACCCTTTTCGCAGATAACAGACGTAGGATGTCACCGGCTGGCC
AACGCGTTGGACCCCTTGAAGGTCCTCTCGACCCTCGACTTGTGCCACAA
TCCGTTCGGCGACAAGGGTTGCCTATCCATTGCAACCTACCTGTCCCAAC
CAGGATGTCCACTCCGATCCCTGTCCCTGGCTGGCTGCCTCGACGTCGAC
CCGGCCGCTTGGAAAACCATTTACGTTCGTGGGAAGGAGGGGATGCGGTG
GGATCCTCCCCGTCCGGGGGACGATGGTGCGGTGTCCTTAGCTTCCGCGC
TAATGTCTCCCCACGGTTGCCCGCTCAGGTACTCTATGTACGAACCGACA
CTGTTCACGTTGTCGTCCGCGAATCAAGTCGCGTACGGCGTCGTATCGAG
GTGTACGGAAAACGGCCGATTGGTAGGTAGCCACAGCTCCGGAATAAACA
ACCGTGCGTTATTGTGCACCGCTCTTCCTCTCACTACCCTCCTCACGACC
TTTTTACAGACCCGGTTGGTTGAAAAGTACCACAGCTCCGGTGGAACCAG
CCGTGCATGGTATTCGCACCGCTCTGCCTCTCACCACCCTCCTCCCGGTC
CTACTATGGACCCCTATAGTATTGGTTGTGGCCAGCGGGCACCGCGGTAG
GGTCCAAGCGATTCTCCTTGACCCTCTTGGTAATGGCATGCACATGCTAA
GCCTCTCTCGCCCCAGACATCTCGGCGTCGATGAGCATTGAGTGCCCAAA
TTGACTATGGTCTATGAATGCTTCCTTTGGATGTAGGAGGCTTGGCATGG
CCAACGCAGGGATGAAAACAATTGGGGCCAAGGCGATCGCGACCGCTCTC
TGCGCGAACCGCACCCTGGAAACTGTCGACTTGTCTGGGAACGACTTCGG
GAGTACGACGGATGCAAGCGCTTGGGAGAGTGCAGCAGACTTGCTGTCGT
TTGGACTTCAGGCGAGTGGCAGGGCTTGTTGCTGTGGTTGCCAACACAGA
AACACGCGTAGATGGGCAAGGAGCTCTGGCTGTAGATGCAGGTCATCCCT
GCATTGTACAAGCCTCCGAGGACTAATAGTCATTACGGGCAACAGCAAGA
GCACTCCTCCTGTCCGCCTTAGCGAGGGATGCGTACAATGACCGGTAGTA
AAATGAACCCGCCAGAATCACTCCGTGCTTACCGTTTCCACATCGTGCTT
ACCGCTGTCCACATAACTCTCGCGGCTCAATTGATGTCGCCTGACCCTAG
GTGAACACAATGGTGCACACCATTGTCCTGCGAGCTTGCGGTCTGAGTCG
CGAACAGGTCTTGGCGATACAAGCAAACACGTCTCCCCAAATCAAATCAG
TCGGCAAAACAAGCCGGCAAGAGGAAAGGAAGGACGAAGCTTGCTCTGAG
GAGGGTGCCGGCGGTGGTAGCAAGAACAAGCAACATCCTTGGCGAGAGGA
AAAGCGGCTCGGATTTCGAGCGGCTTGCCTGAGGGATTGGTTGTTAGACG
CCGCCAGGTAAGCCTCACGTGCGTGATACATCGCTTTAGTGAAATGTTTT
GGGATACATCGTCCACATTTACATACATGCAACCGAACACCAAGTGAAGA
AAAATTATCGTATACGGGAGAAACACTCGGGGGGAGTGACTGCCTTCACG
ATCTTACCTTGCTCTATTCTGTGGCATCCCCAACGAGCAATATTCTTCGC
GTTGGCCTGTGCGTCTTGGCAGGGTCCAAGGGATGCGCTATCCGCGTCCC
CTGTCTCCTGATCCAAATGACACCACCGCATTAGTAGTACCAGCCTGTGG
TGGATGCAACGGGCACGATAGCGTTGCTTTGGTGGCCTCCGATTATCCAA
ATTCTCTACGAACAGGGGAGGGTTCGACCTACGGCGAGAACCGTGACCGA
TCATTGGTAGAGCCACAGCTATGGTCAAGTGTGATGGCACTGGGCAGACT
CGTCGCCTCCTGTGAATCGGGAATGTCGTTACTACGGAGAATGGGTAAAG
CCAACCACATTGCTGGCAATGGATCTACGAGCGACTACAGCGGCTGGCAC
ACGAAACGGCTGTCCCAAGGTTTAGAGACAAAATACAAGATGAGATGCGA
TGGGGGTATCCTACGCCAGGAATCGCTTGATGCTTGCGCGGTTATCACCG
ACGAGGCGCGATCACCTCTCCGTCAAAACTCATTGACCGAGAGAGGGCGG
GTTTCTGAAACCAAACGAAGATCGGCATCAAAACCCACTCTATCGCCACC
GACTAGCTCGCGCGAGTCTTGCAGTAGAGGTGTAAAGGAGACGAGCATTT
TGGAGACACGGGCCAGCCTTCAGCGAGACCATTCTTCAGAGAGTTTACCC
TCAGCTGGGAGCGACGATGGCGGACTTCGTCATGACGTGTTCGAGAATCA
GAGTGGGCCGCCCGGTCGATCCAGCAAGAGCGAGACGGACTTCTCGGTCC
TATTGGGGGCACCAGGCCGCCACGAAGGGGGCAAGGGCGAAGATGGTTTT
CGCGAACGAAATGTTCATGATGGTGATGCTAGGGCGGAGGGACAAGACGA
GTGGGCGAGGGGCGAAACGATTCACTCCTTGTGTGGAGGGGGCAGCACAC
TCATACGCGCCGCGGATCTTGAAGCGGCAGCCGAAGAGGGACGAAGACTT
GGTTTGTTAGCAGCGGCGAAGTGTCTAGATATGGATGAAAAAGAGGCAGC
CCTGTCACGGTTAGTACTTAAACTTATAGCTACACGTGCGTACTGTGAGG
GGGGCAGACGGGGGCGTGCAGAGCTACCAATTCCTTGTGTGGGACCTGTA
ATGAAAGGGCCACAAAGTCTCTGGTGACTGGTGTATCTGAACGCACCTCG
AATTTATCTTTGGTATGTAAAATCTGGATTACGCGTACGACGGGCGACCT
GAGCGTGCTCCAACTTGACACTTTCCCCCCGTTGGATGATCATTTTTTAA
TGGCAGCAAGAGTCCGCAGGTTCACAAACGTTATCTCTGGGAACTGGTAC
ACGAGAAACTTTCGCCTAAACCAAATACTGAGGGCGATTCACACCTTTTC
AGGAAGCCATGCTGTAGCCATCAAGACCATTTGGCGGAAAACGCTCCCTC
TTTGAGCCCTGGCTTTTTCCGATAGTTGAGGTGACTCTTCATCCGCGTCG
GCGTACAGTGGATATCGCCCCCGTCCAGTATTCGCCAAGTATTCGAGGTT
TAGGTGGGACGTACTTCGGTTTGCCGACGCGATTCCACCAGGCACACGTC
AACAAACATTGTCTTGAGCCACGGAAGTACACGCTCGAGGAAAATGAGAC
ACGTTTGGAGCCTCTCTCGTTCAGATAATATTTCGCGCCTCTCTCTTAAC
AACCTGCCTCGACCTCAAAGCGAGCGTCAGTCACTTCGTCGACAGCGAGA
AGGATTTAGAGGGCGAACTCATGCGGAGGTCTCGTCGCTGGAAGCATCTC
TTGCCAATGCTAGGGATCTTCGAAAAGCGGCCGGGGACAGCATGAGGCGC
TTGGAGCCTATTGCGAGAGCTGCAAGAAACTCAGAACGAGGTAAAGCGAC
CATCTCATGGCATCCTCGCCCAGGTCACTTTGCTGTCCTAGAGCCAGATT
GACGAAAATATTTTGAAAGAGGAAGTAACATGCCCCCGTTTTTTTGCGTG
ATTTTCAAAGCTCGGCTGCCCTACGACCAAGCCTGCGCCAACACCAAGAA
TCGTGTTTTTTGGAAAAAATCTCGTAGAGGGCGTTCGGTAGACGTATCGG
GCTGTTTCCGCACCCACGTAGTGATGGAGTAATCGAGGGTTGAAATCGGA
CGAGAAGGGTTGCCATTTCTCTGCCTCTTAAGGTATTAGTCTTAGTTCGA
CTAAGAATCTCTACCATTGTTTGACAATGTTGTGCGCGCGAACGCTAAGG
CGCGTGGCCAACTAACCTTCCAGACACAGAGGACACGTTGGTTGCTCCTG
TCGATCATTTTACTTCCGTTCTTGCTCATCGGGAGCTCGCGAAGAGTGAA
TTGTGTGGGTTGTATCTCATGCCTTTCATCGGGTGCTGGGTCAGAGCGAA
AAACAGAATGTAGAACTGCCAAACACTTGAAATGTTTGTCTAGCTAACGT
TAACTCCTCGTGTTATTTCCTTCCAAACTTCTCGACAGTCATTGTCAACG
CATTGTGTGAGCCACGTATATAGCAGTACTGTGTCATTTGGAGTGCCGGA
CGTCGTAAGTAAATACTCGATTGCGCGCAGGCTGCGGCCAAAGGGTACGC
CATCCAGCACGGATGCGGTGTATGTTATTCTCCGTCCCTTGTTCCACACG
TCGAGCACGCGAGTGCAGTGCTCCCAGCTGTTGGCATCGACACCGATGCC
TTTTCTCTCCAGTACCCGAACTGCCATGCCGTTGTAATTCATGCAGCTGT
CGAAGCGGAACTGCGTGGGCAACAACAGGAAATCGAGACAATCACGTACA
GTTTTGTCCACCAAGTTGAGTTGGAGCGAGACTTACAAGAACGCGCGGAT
CACGCCGAGGAGATGGGAAATGAGCTACGGGGGGCTCGTGGTCGCCTTGA
AGCAGCGGAAAGGTGAGCTTCGAGTGCCTACGACTTTGGCCAACGGTCAT
GGTATTCCTACGTTTTGTTTTACGAGATTGAATCCTAAAGTGTACTGTAG
CCGGTGATCGTGCCAACCAACATTTGATTGGTGCGTCCCACGTTTGGGCT
ATTCATCTCGAATGCATACATCAGCCACACTCTCCTGTCAAATTGGACAT
GATTTCGGCGCCGTAAGCAGGTTAGTGTTCACCCTCGTCCGACGTAACCA
ACTCGTACCCTTCCAACCGTTTTCTCTTAGCCAGAGAGTCCTCGAACATG
CCGGCACGAATTGTAAGGTGAATACCAAGAGTTGTAGCAACTTGCGAGAG
CCACGCTTGTGCTCTCGCCTCCCTCCACAACAGGAGAATTGATGAGCTGG
AAGCGGAGGGGCAAGGCCTCCGATCACGCTTTGGCGTCTACGACACCATG
TTCGGAAAAACAACAGCAGACATATCTTCGGCGATGGCCGTTGTTGTTGC
CAAGCGGAATGCTTTGAGGAGGACCAAGAAAACTGTCGTCGCTTTGGCGT
CGAAATTACAGAAGCTGGCGGAGATTGCCACAGACGAAGAGGCGTTGAGG
GCGGTTGTTCCTGCTGGAAGTGACCGGTGAGTCCGTTACCCTCGATTGTC
CGATACGATGCCTAGCGTGGGACTCGTTGTGATCACAATGACCTTGCGTT
TAGTCCACTCAGTTGCACAGTTTCTGCCAGGGCTAACCAACAGCGCCGCA
GAGCCATGACATGTATATTTGGCAAATTGGCGCGGGACGTATCTGCACAA
CCAACAGGACTGTTGACGTCTTCCATTATGCGTGAAGTGGGCCATTCTGT
TTGCCATGGGGATAATGCTGGAGCCTTCCGCGGCCCATTACCTCAAATTA
ATCGCTTACGTGTTGGGCTGCGCTTTATTACCGTCTTCGGTGGACTTGAT
CAGCTCCAGGGGTGATTACCACGGTAGTCTAGAGCATCAACCGCTGATGC
GGCCGCCTTCTTACCCCCTCCCCCCGCGACCTCCTTTGTAGGTCTTGATA
TTCCTATCGCGGAGGGCATAAAAATTTGGTATACGGTCACGTACGTGGTG
GATTGGATGAACAAGACGGGAAGGATGTCTCGCGTAACCGTTCGGAATTG
AGTAACCTGAGCTTCCATACTGCGCACGATGCAGGCGAGACCTGGACCTT
CAAGTTGCGGAGGCTGTGCGTATAACATCGGAAGCAGCACGGGAGACAGA
ACAAACGAAGTTACGGCGCGATGAGGCGGCGGTGGCATTCGAAAAGGCCC
GGCTGAAACTTTCCAGGTATGTGGGGTGTAGCACGGGAGGGCGAGATTTC
CTCTCGGCTTGTCGCCATCGCTTCATGGTCATCCAACAAAAGTTGCAAAC
ACGTCAAGATGCGACCCCGAGCACTGCGACACTCCCTTCCTCAGAGACAG
AACTCAAAGAAACAGCTACGAGACACTCTTCGTTTTATCATGCACGGACT
GCCACACCTCATATAGCGGAGACGACATAGGTCATGGTCTCGTGCTCCCT
GGGAGTAACGACGCGGCAACAAGGGCGCGAATAGCTCCTTCCGTAAGGTC
GACAGCTGACAACACTAGGCTACAGGGCAAGCTGTCTTCCGATGACCTGT
CGTCATCGAACGAAGGAACGCAAGCCCTTGTTGTGGGTGCGCCCGGGCTG
AGGGGCGGTGCTCGTGTGCACATTCCCAACGTTGCTGACGATGGTGGCAT
CTACGCCACCAGTGGAGACGCGAAGAGTGGGGATGGGAGTCAGGAGCAGC
ACGCACGACCAGCGTCTGCGATAAGAGGGAAGGCACGATCATGGCGGGGG
GGGGGAGGGGCAGGGACAGAGGGAGCGATCCCGTTGCACGTAGGTGAGGC
AGAGTGCATTGAAGAAGGCGAGGGTTGCATCGACCTATTGGTAGACCTGT
TTCTGTCCGGACGATATCTAGAACGATGGACGGTTCATGTTAGCACACAC
TACAAGATAGGAAACTGCCACTGAGAACAAAGATTGGAAGCGTTGGCCTG
GTCAAAGCAACGGGCTGTCAACAATTTGATGAAATAGTCTCATCATACAC
ATGAAACCGAACCAGACCAAGGGTGAACATTTTTTTTTATGGAGACGGTA
CTTCAGTACGATGGCATGAGAAACGTCTGCACCAGTTGGCACACCGAATT
TCCAATGATTCAACGCACGAATGCCATCAACCCAAACAAAATCACCGGCA
CCCCATCACTCTACTACATTCCGAAGTCACCGCGACTAAGACGGTCCCGA
ACGCCCGTCCGAATAACCTTTCCAGACGAAGCCATGGTTGAAGCAGACCC
AACATTTGACGCTACCGGAGACAAAACTCCAAACGATAAAATCAGCACGA
GCCCCTTCGCGCACACAAAATCGCCAATGGTAGCGGAGGTGAGGGTCATT
TTGTCGGAACGATTCCGTTTCGGAAGATTTTCCCACGAAAACTGCCGACG
TCCTCTTTCGTGATTGTATCGCCTCACTTTTTTTTCCAAGTCTCGGTGAT
GTGAAGTGCTACTCGTGTTGTTGTACGGTAGCAGTTTTCGTTGGTGCGAT
AGTTCGAACGCGTTCGTCTCTCCCTTCGGAGTTGAGTTTCGGTTTGAGAG
TCAGAGGTGAAAAACGCCCATAGCAAAAACAGCGACCAAGTGGATGGACG
AGACACATCGGGTGTAGTTAATCGCCCGTTTTCCCGTCCTGCGACATTTC
CGCCCGTTTCCACGACTGATGCTTTCACCGAGAAGGAGGTGCAGCGTCTG
AGCCAAGCGTACTCCGAGGCAAATCAGGAACACCTGAACGCTGTGGTAAG
CGATGCTCCACGTAGAATTCAGAACTCATTCGCCTGCGATACACAGGAAG
AGCAAAACAGCGCTCATCTCGAACTTGCCGGTCTTGGTTGCCCTGTCATA
CGGTTTCGTCGGGTGGGTGTACATCGGAGGTCAAGGTTTCCATGGTATTG
AACGGACTCTATGGACCAACCAGCGATCATGTTCTTTTCTTTCAGGCCCG
TAGTGGAAATCTTGATCGGAGTAACTCAGTAAATATTTTGGTAAACGTGT
TGCGATGCGGCTAGAGTGTTTTCCCATCCCGCTTCAACTGCGTAATTCTT
CTCGTGACGACTTTCCTTTAGCACTTTTGTGCATCCCTCCTCTCTCGTAT
ACCTCCCCTCCCGCTTGGCAAAACACGCCAGGCTCGGCAGGAGAGCCCGC
ATGTGAAGCGTGCACTAGCACTCATCCGAGACCATGGCGACATCATTCGA
TTGAAGAAAAAGAAAAAGCCCGAAGGTATGATCGGACGCCACAAGAATTT
ATTGACACACGTTCTGTTCGGGAATCCTCATGTCCATGGATGACGGTAGT
CTCTAGAACAGTGACCCCAGCAACCATACCCGGTCGGGTTGGAACACGTC
GGGATAACTCGACCTGTCGGCGTTGGCCGGGCTTTGCTCGTTTCAGGCGA
GAAGGTTGTGCAGAGGCACGTGCGTGTACATCATTATTTCGTGGGTAGGC
CGTCTCTCGTGATCGCATGGAATTTTTCCTCCAGCAAAGGCAGCGTTCCG
ACTTCGAAAGAGCTCTATCGACCGTTAGTGATCAATCAAACTGATCTCAT
CCGTTGAACCAAACACGGCGGAAGCAAAAAATACCGTGCCTTCACAGGCA
TAGGTTGCAATGGACGCGGATCTCTCGTAACAATCTAACACGACGACGAG
CGCACGGCGAGACAAGCAATACAAGGGGTTGACGATTAGGCTCCACCGAA
ACACCTAGTGTTAGGCTTCCGTCACGTGCCACGAATTACTCCTTTCGGTG
GGCACCACAAGGCCAACTTCTCCAGCACTGTGTATCAGCACCCAACCCTC
TCCTCGAGCTTTCCACCAACTGCTCTTGCCTCTCCTGCCTTTCCAAGCAG
ACATCCATCGAGACAAGCTAGTGCAGGGGCGACCAAGATCGAAACGTCGC
CCACTGGGAGAGACGCCTCTGCTCGGTATGCAGCTGAATGGCGGGATTGC
GCTTGGGGCTGAAATCGCAATGCTGCGGGTACGATTTTGATCGAAGTTTA
CGCTGTTCAAGACTAGGCCAACTGTGCGGTAGCATCACTTTTCGTATTGA
CAAAAATGTTTACCATACTCTGATTTTACACCACTGTCAGCAAAATTCAT
CTCACAACAGCTTACCAGACGAACACATCCGGCTCGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCAACATTGCACTCAA
GGCACGAAGGGTTAACACATCCGGACGAATACCCAGACTCCAGCCCACTG
GCTTTGGGATCCCCCCCCCCCTCTCCCGCCGTTGCCGCCGCCCAATGCGT
ACAGGGATCAGGCGAGGAAAATGAAGAAGGAAACTCTAGTCTTCCAGAAA
TAGACGACAGGTTTCTCACAGTGGGGCAACGACTCCGGCGCTTGCGTGAC
GCGAGGGACAATCTTCAACGCGAGAAACACAGGGCGCATTTGGAGTACAG
GTCCGATGAAATCAGCTTCCACGCGCTGTAACCACCTGCATGGCCAGGAC
AACCTACGACTAGGCCAGCAGATACTCGTTAACTGGCTAGTTTGTAGGTG
GATCCGAAAGCTGAGTGATACGGGACCAGGAGGCTAAATTTCAGTATGAT
TCGCCGTCGTCATCGATTGTATCGCCCACGATGGCGGGCTTGAACGGACG
GTAAGCGCACAGCAGCACCAAAAGCAGCATGGATGACGGCAACAGCAACA
TCGCTCACGGAACTCTAGACGCCACTGACCCGTTGTGTTTTTTCCAGGTT
CGGATTGATTATTCGTAGTTCGACTTTTCCATCCACATGGTACGGATATT
TGAAGGTACCGAGTGGCGACCGGTTTTGCAATGTGAAGACAACCACATCA
ACAACAGCGGTACCTCTCCAACCGAAGAGCTCTGAACCATGTATTTCCTT
TTGCAGTCGACAGGTGAAAAGAAATCTCCGAGAACGAAAACGTTTCGTTC
TGGGGGAGAAACGGGCCAGACGCATTGCCAAAACTATGGACACCAAACAG
CTCGTGGAGGCATTGAGGGAGAGGGGTTACGAGACGGAGGGATCAGAACA
GTTGGACCAGCTTAGGCGATTATTCATTGAGGACATTCAGCCAGAAATTC
GCGTCCGCCTTCACGCCACTTCAAGGTGAGCGCGAAACAGACCTGCGCCC
CACTAACGGAGATAGATGCAGGGCGGCGAATTTCAGTGTGTGCAATAACA
AATCTGAAGAACAGCGGTTTCAAATGAGGTTGACTCGCTTGTAGGTTTGG
GGCATTCGATACACTGTTTTGTCTTGTTTAACATGTGAAAAGGGCTTGAG
TGCGAAAAGCTGTTTAAACAAACTCCATCATGGCAACGCGATTGTGCGTT
TCTCAGTAAGGTATCCCCTGCAGGGTAGCGTGCAAGACGTGGACACAGTT
GCATAGATAGCTACAATAAGGCGCTACAAAAAATATGGAGTTTGTCGACC
TTCCCGCGTTTTACCTTGTTATGGACCAAATCCCACGAAAGCTCTCACGC
CAGAACTCAGCCGGTGTACACCCGGGCCACCTCCAGTCGGGTTTGAGGTC
CTTGCAGACGGACAGTTCGCAGACTCTACTCCCCCGCTCCCGACATGTTC
CCTATTGCGCCCGTTCCCCAGATGGACTAAGAGCAGAAAGAAGCACCGAG
AGAGGACGGACACCGTTGAAGTCGGCGAGATCGTTGCGAGGAGGCAACAA
CTCACGTCGCCAAAGCGGGTTACTCCATTTTCTCCCTCGCCGTTCATCAG
GCTCAACGTGCGGCACGCCGCCACCGCATAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1158:96..10676+ >mRNA_Ecto-sp13_S_contig1158.1375.1 ID=mRNA_Ecto-sp13_S_contig1158.1375.1|Name=mRNA_Ecto-sp13_S_contig1158.1375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3246bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1158:96..10676+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTGCACACCATTGTCCTGCGAGCTTGCGGTCTGAGTCGCGAACAGGT CTTGGCGATACAAGCAAACACGTCTCCCCAAATCAAATCAGTCGGCAAAA CAAGCCGGCAAGAGGAAAGGAAGGACGAAGCTTGCTCTGAGGAGGGTGCC GGCGGTGGTAGCAAGAACAAGCAACATCCTTGGCGAGAGGAAAAGCGGCT CGGATTTCGAGCGGCTTGCCTGAGGGATTGGTTGTTAGACGCCGCCAGGG TCCAAGGGATGCGCTATCCGCGTCCCCTGTCTCCTGATCCAAATGACACC ACCGCATTAGTAGTACCAGCCTGTGGTGGATGCAACGGGCACGATAGCGT TGCTTTGGTGGCCTCCGATTATCCAAATTCTCTACGAACAGGGGAGGGTT CGACCTACGGCGAGAACCGTGACCGATCATTGGTAGAGCCACAGCTATGG TCAAGTGTGATGGCACTGGGCAGACTCGTCGCCTCCTGTGAATCGGGAAT GTCGTTACTACGGAGAATGGGTAAAGCCAACCACATTGCTGGCAATGGAT CTACGAGCGACTACAGCGGCTGGCACACGAAACGGCTGTCCCAAGGTTTA GAGACAAAATACAAGATGAGATGCGATGGGGGTATCCTACGCCAGGAATC GCTTGATGCTTGCGCGGTTATCACCGACGAGGCGCGATCACCTCTCCGTC AAAACTCATTGACCGAGAGAGGGCGGGTTTCTGAAACCAAACGAAGATCG GCATCAAAACCCACTCTATCGCCACCGACTAGCTCGCGCGAGTCTTGCAG TAGAGGTGTAAAGGAGACGAGCATTTTGGAGACACGGGCCAGCCTTCAGC GAGACCATTCTTCAGAGAGTTTACCCTCAGCTGGGAGCGACGATGGCGGA CTTCGTCATGACGTGTTCGAGAATCAGAGTGGGCCGCCCGGTCGATCCAG CAAGAGCGAGACGGACTTCTCGGTCCTATTGGGGGCACCAGGCCGCCACG AAGGGGGCAAGGGCGAAGATGGTTTTCGCGAACGAAATGTTCATGATGGT GATGCTAGGGCGGAGGGACAAGACGAGTGGGCGAGGGGCGAAACGATTCA CTCCTTGTGTGGAGGGGGCAGCACACTCATACGCGCCGCGGATCTTGAAG CGGCAGCCGAAGAGGGACGAAGACTTGGTTTGTTAGCAGCGGCGAAGTGT CTAGATATGGATGAAAAAGAGGCAGCCCTGTCACGCGAGCGTCAGTCACT TCGTCGACAGCGAGAAGGATTTAGAGGGCGAACTCATGCGGAGGTCTCGT CGCTGGAAGCATCTCTTGCCAATGCTAGGGATCTTCGAAAAGCGGCCGGG GACAGCATGAGGCGCTTGGAGCCTATTGCGAGAGCTGCAAGAAACTCAGA ACGAGCTGTCGAAGCGGAACTGCGTGGGCAACAACAGGAAATCGAGACAA TCACGTACAGTTTTGTCCACCAAGTTGAGTTGGAGCGAGACTTACAAGAA CGCGCGGATCACGCCGAGGAGATGGGAAATGAGCTACGGGGGGCTCGTGG TCGCCTTGAAGCAGCGGAAAGGAGAATTGATGAGCTGGAAGCGGAGGGGC AAGGCCTCCGATCACGCTTTGGCGTCTACGACACCATGTTCGGAAAAACA ACAGCAGACATATCTTCGGCGATGGCCGTTGTTGTTGCCAAGCGGAATGC TTTGAGGAGGACCAAGAAAACTGTCGTCGCTTTGGCGTCGAAATTACAGA AGCTGGCGGAGATTGCCACAGACGAAGAGGCGTTGAGGGCGGTTGTTCCT GCTGGAAGTGACCGGCGAGACCTGGACCTTCAAGTTGCGGAGGCTGTGCG TATAACATCGGAAGCAGCACGGGAGACAGAACAAACGAAGTTACGGCGCG ATGAGGCGGCGGTGGCATTCGAAAAGGCCCGGCTGAAACTTTCCAGCGGA GACGACATAGGTCATGGTCTCGTGCTCCCTGGGAGTAACGACGCGGCAAC AAGGGCGCGAATAGCTCCTTCCGTAAGGTCGACAGCTGACAACACTAGGC TACAGGGCAAGCTGTCTTCCGATGACCTGTCGTCATCGAACGAAGGAACG CAAGCCCTTGTTGTGGGTGCGCCCGGGCTGAGGGGCGGTGCTCGTGTGCA CATTCCCAACGTTGCTGACGATGGTGGCATCTACGCCACCAGTGGAGACG CGAAGAGTGGGGATGGGAGTCAGGAGCAGCACGCACGACCAGCGTCTGCG ATAAGAGGGAAGGCACGATCATGGCGGGGGGGGGGAGGGGCAGGGACAGA GGGAGCGATCCCGTTGCACGTAGACGAAGCCATGGTTGAAGCAGACCCAA CATTTGACGCTACCGGAGACAAAACTCCAAACGATAAAATCAGCACGAGC CCCTTCGCGCACACAAAATCGCCAATGGTAGCGGAGGAGGTGCAGCGTCT GAGCCAAGCGTACTCCGAGGCAAATCAGGAACACCTGAACGCTGTGGCTC GGCAGGAGAGCCCGCATGTGAAGCGTGCACTAGCACTCATCCGAGACCAT GGCGACATCATTCGATTGAAGAAAAAGAAAAAGCCCGAAGCAGACATCCA TCGAGACAAGCTAGTGCAGGGGCGACCAAGATCGAAACGTCGCCCACTGG GAGAGACGCCTCTGCTCGGTATGCAGCTGAATGGCGGGATTGCGCTTGGG GCTGAAATCGCAATGCTGCGGGGATCAGGCGAGGAAAATGAAGAAGGAAA CTCTAGTCTTCCAGAAATAGACGACAGGTTTCTCACAGTGGGGCAACGAC TCCGGCGCTTGCGTGACGCGAGGGACAATCTTCAACGCGAGAAACACAGG GCGCATTTGGAGTACAGTCGACAGGTGAAAAGAAATCTCCGAGAACGAAA ACGTTTCGTTCTGGGGGAGAAACGGGCCAGACGCATTGCCAAAACTATGG ACACCAAACAGCTCGTGGAGGCATTGAGGGAGAGGGGTTACGAGACGGAG GGATCAGAACAGTTGGACCAGCTTAGGCGATTATTCATTGAGGACATTCA GCCAGAAATTCGCGTCCGCCTTCACGCCACTTCAAGATGGACTAAGAGCA GAAAGAAGCACCGAGAGAGGACGGACACCGTTGAAGTCGGCGAGATCGTT GCGAGGAGGCAACAACTCACGTCGCCAAAGCGGGTTACTCCATTTTCTCC CTCGCCGTTCATCAGGCTCAACGTGCGGCACGCCGCCACCGCATAA back to top
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