prot_Ecto-sp13_S_contig11548.1351.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11548.1351.1
Unique Nameprot_Ecto-sp13_S_contig11548.1351.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length132
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11548.1351.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.820e-59
Identity = 125/132 (94.70%), Postives = 126/132 (95.45%), Query Frame = 0 
Query:    1 MVEVSGSSGESEGLGVGQGDDRKAVAIGAMERKSSKSLIARLDQAFRDMAEQQRRFAQTKRNLLAEKTMEVAAAEAKGRRELQEARTLAAAMEDKASSLQEHVSEAAKKISTFKAMEEEQRKRRQSAEEDTD 132
            MV VSGS  ESEGLG GQG DRKAVA GAMERKSSKSLIARLDQAFRDMAEQQRRFAQTKRNLLAEKTMEVAAAEAKGRRELQEARTLAAAMEDKASSLQEHVSEAAKKISTFKAMEEEQRKRRQSAEEDT+
Sbjct:  867 MVAVSGSGEESEGLGAGQGGDRKAVAPGAMERKSSKSLIARLDQAFRDMAEQQRRFAQTKRNLLAEKTMEVAAAEAKGRRELQEARTLAAAMEDKASSLQEHVSEAAKKISTFKAMEEEQRKRRQSAEEDTE 998
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11548.1351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMX2_ECTSI1.820e-5994.70Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..109
NoneNo IPR availableCOILSCoilCoilcoord: 42..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11548contigEcto-sp13_S_contig11548:2118..3913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11548.1351.1mRNA_Ecto-sp13_S_contig11548.1351.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11548 2118..3913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11548.1351.1 ID=prot_Ecto-sp13_S_contig11548.1351.1|Name=mRNA_Ecto-sp13_S_contig11548.1351.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp
MVEVSGSSGESEGLGVGQGDDRKAVAIGAMERKSSKSLIARLDQAFRDMA
EQQRRFAQTKRNLLAEKTMEVAAAEAKGRRELQEARTLAAAMEDKASSLQ
EHVSEAAKKISTFKAMEEEQRKRRQSAEEDTD
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