prot_Ecto-sp13_S_contig11504.1321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11504.1321.1
Unique Nameprot_Ecto-sp13_S_contig11504.1321.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11504.1321.1 vs. uniprot
Match: D7FVK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK2_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.460e-14
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:    1 TIAVLGAQGATPLNVAAEKGHLEVAKVLMHAGADVNSRMPSGETPL 46
            ++    AQGATPL+ AAEKG+LEVAKV MHAGADVNSRMPSGETPL
Sbjct:    8 SVVATSAQGATPLHFAAEKGNLEVAKV-MHAGADVNSRMPSGETPL 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11504.1321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVK2_ECTSI1.460e-1478.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 8..37
e-value: 7.4E-5
score: 32.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 8..40
score: 13.678
NoneNo IPR availablePFAMPF13857Ank_5coord: 9..46
e-value: 7.4E-8
score: 32.5
NoneNo IPR availableGENE3D1.25.40.960coord: 7..46
e-value: 3.1E-12
score: 48.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 8..46
score: 17.475
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11504contigEcto-sp13_S_contig11504:1678..1818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11504.1321.1mRNA_Ecto-sp13_S_contig11504.1321.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11504 1678..1818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11504.1321.1 ID=prot_Ecto-sp13_S_contig11504.1321.1|Name=mRNA_Ecto-sp13_S_contig11504.1321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
TIAVLGAQGATPLNVAAEKGHLEVAKVLMHAGADVNSRMPSGETPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf