prot_Ecto-sp13_S_contig1149.1303.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1149.1303.1
Unique Nameprot_Ecto-sp13_S_contig1149.1303.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length536
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1149.1303.1 vs. uniprot
Match: D8LDV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV3_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 4.390e-44
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0 
Query:  220 MTRVEELARRLVPGAVSTGAALLMPILARKPHGTEGTVAAGPVEASMANSAFPVLELLVNLSCADPHAIYNWLVSCSHDDGSPGGALKGLEIALNSRVEK 319
            MTRVEELAR LVPGAVSTG ALLMPILARKPH    TVAAGPV++SMA+SAFPVLELLVNLSCADPHAIYNWL SCS DDGSPGGALKGL+I LNS VEK
Sbjct:    1 MTRVEELARSLVPGAVSTGVALLMPILARKPH---STVAAGPVDSSMASSAFPVLELLVNLSCADPHAIYNWLASCSPDDGSPGGALKGLKIELNSGVEK 97
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1149.1303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDV3_ECTSI4.390e-4486.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1149contigEcto-sp13_S_contig1149:558..3422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1149.1303.1mRNA_Ecto-sp13_S_contig1149.1303.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1149 556..3422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1149.1303.1 ID=prot_Ecto-sp13_S_contig1149.1303.1|Name=mRNA_Ecto-sp13_S_contig1149.1303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=536bp
AALGELKNSLVGDDEAKRTALSLLIVEDVLTFLDVVAARGINDCYLQSAL
LHGVGLFAILSSPPVVPGLQAHLAPNGSRIVQHIVRALEWGKSSCPSSSS
VKSSSRGSNASAERLTAISLRALCACVAPLTTITYASCSSGDVGVGTASA
AFAASAASKEKFKMVTALVKASGLILEIIVAATSPTPTTSTTSRGRGTCP
TSWRWSPNLNYLGVEALAAMTRVEELARRLVPGAVSTGAALLMPILARKP
HGTEGTVAAGPVEASMANSAFPVLELLVNLSCADPHAIYNWLVSCSHDDG
SPGGALKGLEIALNSRVEKVRILAGLVLVSCFKSSKMRLGTTSSPRPSSY
QSTESPALDEIIAHRVLPLFVRTLSSWSTLPSTINGQGGGGGGSRVRGTG
GFHCSTSNNTSGSAEASFATVCGGFAAAVTAALTATTELGSLRRQREAVA
YGTVDSLVVFLKRARTEAAAAGPESVSSLSARTSTATADNNAPSGAPSSA
AATSAAAAAAAAVEESSRSMDSRLIRTATETGLKAL
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