prot_Ecto-sp13_S_contig11455.1276.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11455.1276.1
Unique Nameprot_Ecto-sp13_S_contig11455.1276.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig11455.1276.1 vs. uniprot
Match: D7FX52_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 7.880e-47
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0
Query:    1 MELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRV 84
            MELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVR+
Sbjct:  195 MELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRL 278          
BLAST of mRNA_Ecto-sp13_S_contig11455.1276.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.240e-46
Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    1 MELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRV 84
            MELLGETVK VATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWR YLVRPDFLGAVFNVYHRVR+
Sbjct:  195 MELLGETVKVVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRTYLVRPDFLGAVFNVYHRVRL 278          
BLAST of mRNA_Ecto-sp13_S_contig11455.1276.1 vs. uniprot
Match: A0A7S3PXS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXS9_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.910e-9
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 0
Query:   18 SDTSVLELVTTVVNVCAEVLSWEFKYVEA-WQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVR 83
            SD S+++    VVN+  +VLSWEF  +   W    +  L+RP   WR YL+RPDFLGAVF VY  +R
Sbjct:  283 SDPSLVDASCGVVNLTIDVLSWEFGSLGGKWGRTGSSALVRPPESWREYLIRPDFLGAVFQVYTSIR 349          
BLAST of mRNA_Ecto-sp13_S_contig11455.1276.1 vs. uniprot
Match: A0A7S2PDL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDL1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.150e-9
Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    8 VKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAW---------QIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVR 83
            V  VA P+ L+  ++      +V++  E+LSWEF    AW         Q+  +  LI+P   WR YL+RPDFLGAV NVY  VR
Sbjct:   11 VNNVALPDVLTRRAI-----AIVSLTIEILSWEFGGGSAWNAASFASSAQVSASLVLIKPPVEWRDYLIRPDFLGAVVNVYTYVR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11455.1276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX52_ECTSI7.880e-4798.81Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5K5P3_9PHAE4.240e-4696.43Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3PXS9_9STRA1.910e-947.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2PDL1_9STRA3.150e-941.18Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11455contigEcto-sp13_S_contig11455:58..309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11455.1276.1mRNA_Ecto-sp13_S_contig11455.1276.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11455 58..324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11455.1276.1 ID=prot_Ecto-sp13_S_contig11455.1276.1|Name=mRNA_Ecto-sp13_S_contig11455.1276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIP
PAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRV
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