prot_Ecto-sp13_S_contig11429.1261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11429.1261.1
Unique Nameprot_Ecto-sp13_S_contig11429.1261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11429.1261.1 vs. uniprot
Match: D8LJL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL6_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.180e-59
Identity = 103/110 (93.64%), Postives = 104/110 (94.55%), Query Frame = 0 
Query:   32 TAVRMETARKNLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQETLQSLTTRGRVSSVARKRAERPWIEASASCSPAGPSTSPSHQRTNANK 141
            TAVRME AR  LTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQETLQSLTTRG+VSSVARKRAERPWIEASAS SPAGPSTS S QRTNANK
Sbjct:  183 TAVRMENARAYLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQETLQSLTTRGQVSSVARKRAERPWIEASASSSPAGPSTSLSPQRTNANK 292
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BLAST of mRNA_Ecto-sp13_S_contig11429.1261.1 vs. uniprot
Match: A0A6H5KZ97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ97_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.520e-31
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 
Query:   32 TAVRMETARKNLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQE 93
            TAVRMETARK LTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQE
Sbjct:  228 TAVRMETARKYLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQE 289
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11429.1261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJL6_ECTSI2.180e-5993.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ97_9PHAE1.520e-3198.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11429contigEcto-sp13_S_contig11429:1574..3621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11429.1261.1mRNA_Ecto-sp13_S_contig11429.1261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11429 224..4167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11429.1261.1 ID=prot_Ecto-sp13_S_contig11429.1261.1|Name=mRNA_Ecto-sp13_S_contig11429.1261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
MKEQAGSKALEEAEAVKRIAQEEAELARRQATAVRMETARKNLTARLLSD
EGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQETLQSLTT
RGRVSSVARKRAERPWIEASASCSPAGPSTSPSHQRTNANK*
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