prot_Ecto-sp13_S_contig11395.1219.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11395.1219.1
Unique Nameprot_Ecto-sp13_S_contig11395.1219.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length440
Homology
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D8LP41_ECTSI (Mannuronan C-5-epimerase (Partial) (Fragment) n=2 Tax=root TaxID=1 RepID=D8LP41_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 1.060e-172
Identity = 253/434 (58.29%), Postives = 313/434 (72.12%), Query Frame = 0
Query:    1 MDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTSSCLNSASDVDFGEVCSDAAI 432
            +DG+ GGCA+ T +HE+LG  SPL+PLETPGEWML E L+VLDGITL  YGT++GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D  DGRS++SAISEV++D++E C GSAKN MGEARMD+E  +IA+LG E +ESWG+SWKLRG+C DK N D YEG+GVYGN+L SE H L+YG Y YR   A+   N+V+++E+YGFDPHD S+ +TISHN V+ + NHG++++KYCH+A                                    SG  F ESS G VYNNTVR N HGIRFSVGSR NV+A N  E N+GYDLYQYAG DEVV V+SG+P  NV + N+FSG V G RLD S+DTQ + N    W   EM DS NTLV GN+FP  M +T + SC+NSASDV FGEVC+DAAI
Sbjct:   54 IDGSRGGCASPTMVHEALGDASPLFPLETPGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSVNITISHNDVYFNFNHGVIWSKYCHNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVAENTFEANSGYDLYQYAGSDEVVEVDSGNPTGNVIYANLFSGNVGGARLDDSIDTQLIINSVEDWASIEMVDSMNTLVQGNSFPDDMMYTSSGSCINSASDVSFGEVCTDAAI 487          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 4.240e-162
Identity = 246/441 (55.78%), Postives = 311/441 (70.52%), Query Frame = 0
Query:    1 MDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVY-GNAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTSSCLNSASDVDFGEVCSDAAITSPSGQS 439
            +DG+ GGCA+ T ++E+LG  SPL+PLETPGEWML E LYVLDGIT   +GT+ GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D  DGRSY+SAISEV++D++E C GSAK  MGEARMD++  +IA+LG E  ESWG+SWKLRG+C DK N D YEG+GVYGN+L+S+ H ++YG Y YR   A+  GN+V+++E+YGFDPHD S+ +TISHN V+ + NHG++++KYCH+A                                    SG  F ESS G VYNNTVR N HGIRFSVGSR NV+A N  E+N G+DLYQYAG+D VV V+SG+P  NV F N FSG   G RLD SV TQ V+N    W  F+M DS NTL+ GN FP  M +T + SC+NSASDV FG++C++AA   P  QS
Sbjct:  349 VDGSRGGCASPTTVYEALGDASPLHPLETPGEWMLTESLYVLDGITFNLHGTDAGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSYLSAISEVVLDASETCVGSAKEDMGEARMDIQNCEIAFLGYEEVESWGISWKLRGVCNDKSNLDLYEGVGVYGNLLDSDVHDMYYGHYGYRQSFALLSGNSVYNNEVYGFDPHDDSVNITISHNEVYFNFNHGVIWSKYCHNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVADNTFEENTGHDLYQYAGNDAVVEVDSGNPTSNVIFANQFSGNTGGARLDDSVGTQLVANTVEDWASFDMGDSVNTLIEGNTFPVDMMYTSSGSCINSASDVTFGDICTNAAAIDPFDQS 789          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 3.300e-107
Identity = 194/448 (43.30%), Postives = 262/448 (58.48%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGVAG-LRLDYSVDTQFVSN-----DAVKWVDFEMRDSTNTLVLGNAFPSGMSH------TPTSSCLNSASDVDFGEVC 427
            T GGCA L +I ES    +PLY ++           G W+L E LYV DGITLK YGT+ GGD D L+L S S   +N+RAHGGSLD + TK  SWD +T   D D  DGRSYISA+SE++ D  E CEG+AKN+MGEARMD+E S+I YLG + SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HHL +G Y+Y H    +  N +HD+  YGFDPHD S  +TI  N V+N+G HGI+ +K C+   +  N V   +    G F     D + +  N + +NGD+G    ES +  V  NT  NN +G+R SVG  DNV + N++ +N+ Y+ Y Y G DE  VV SG    NVF QN FSG    +++  +  TQF+ N     DA   V     D+ N+++ GN    G+            SC +  SD  +  VC
Sbjct:   69 TRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLV-VRFDDAMNSVMQGNT---GLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 2.610e-105
Identity = 179/389 (46.02%), Postives = 237/389 (60.93%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGVAG-LRLDYSVDTQFVSN 379
            T GGC  L +I ES     PLY ++           G W+L E LYV DGITLK YG+  GGD D L+L S +   +N+RAHGGSLD +STK  SWD +T   D D  DGRSYISAISE++ D  E CEG+AKN+MGEARMD+E S+I YLG   SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HH+ +G Y+Y H    +  N +HD+  YGFDPHD S  +TI  N V+N+G HGI+ +K C+   +  N V   +    G F     D + +  N + +NGD+G    ES +  V  NT  NN +G+RFSVG  DNV + N + +N  Y+ Y Y G DE  VV SG    NVF QN FSG    +++  +  TQF+ N
Sbjct:   65 TRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDN 453          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 9.240e-100
Identity = 172/410 (41.95%), Postives = 243/410 (59.27%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQN-VFSGVAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGN 400
            T GGC  L +I E     SPLY ++           G W+L E +YV DGITL+ +G + GGD D L+L S S   +++RA+GGSLD +STK  +WD +    D D  DGRSYISA+SEV+ D  + C G AKN+MGEARMD+E S++AYLG   +E++GL+WK+RG CVDK N + ++ + VYGNI +S+ HH  +G Y+Y H    +  N +HD+  YGFDPHD S  +TI  N VWN+G HGI+ +K C+   +  N V   S+   G F     D+  +  N + +NGD+G    ES +  V +NT  NN +G+R SVG   N+ + NV+  +  ++ + Y G D+  VV+SG    NVF +N +  GV  + L  +  TQF+ N           D+T TL+ GN
Sbjct:   36 TRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: O39824_9PHYC (GP-1 (Fragment) n=4 Tax=Phaeovirus TaxID=181085 RepID=O39824_9PHYC)

HSP 1 Score: 301 bits (770), Expect = 1.370e-97
Identity = 142/223 (63.68%), Postives = 181/223 (81.17%), Query Frame = 0
Query:    1 MDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASL 222
            +DG+ GGCA+ T I+E+LG  SPL+PLET GEWML E L+VLDGITL  YGT++GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D  DGRS++SAISEV++D++E C GSAKN MGEARMD+E  +IA+LG E +ESWG+SWKLRG+C DK N D YEG+GVYGN+L SE H L+YG Y YR   A+   N+V+++E+YGFDPHD S+
Sbjct:    7 VDGSRGGCASPTTIYEALGDASPLFPLETAGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSV 229          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 3.890e-96
Identity = 174/410 (42.44%), Postives = 234/410 (57.07%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQN-VFSGVAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGN 400
            T GGC  L +I E     +PLY +++          G W+L E L+V DGITLK +GT+ GGD D L+L S S   +N+RAHGGSLD +STK  +WD +    D D  DGRSY+SA+SEV+ D ++ C G AKN+MGEARMD+E S++ YLG   SES+GL+WK+RG CVDK N D +E + VYGNI +S+ HH  +G Y+Y H    +  N +HD+  YGFDPHD S  +TI  N V+++G HGI+ +K C+   +  N V   +    G F                   D+G    ES +  V +N   NN +GIRFSVGS  NV   NV+  +  Y  Y Y G D   VV+SG    NVF +N +  GV  ++L  +  TQF+ N           D+  TL+ GN
Sbjct:   62 TRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.990e-92
Identity = 156/337 (46.29%), Postives = 209/337 (62.02%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDN 328
            T GGC  L +I ES     PLY ++           G W+L E LYV DGITL+ YG+  GGD D L+L S +   +N+RAHGGSLD +STK  SWD +T   D D  DGRSYISAISE++ D  E CEG+AKN+MGEARMD+E S+I YLG   SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HH+ +G Y+Y H    +  N +HD+  YGFDPHD S  +TI  N V+N+G HGI+ +K C+   +  N V   +    G F     D + +  N + +NGD+G    ES +  V  NT  NN +G+RFSVG  DNV + N + +N
Sbjct:   65 TRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNN 401          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 291 bits (744), Expect = 5.210e-90
Identity = 176/440 (40.00%), Postives = 248/440 (56.36%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYG--VGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSND--AVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTS-SCLNSASDVDFGEVC 427
            T GGC  L  I   L   +PLY ++           G W+L E LYV DGITL+ +G + GG  D L+L S S   +N+RAHGGSLD +STK  +WD +     +D   GRSYISA+SEV+ DS ++C+G AK +MGEARMD+E S++AYLG   SES+GL+WK+RG+C D  N + ++ + VYGNI +S+ HH ++G Y+Y H    +  N +H +  YGFDPHD S  +TI  N V+N+GNHGI+ +K C+                VG F     D + +  N + +NGD+G    E+ +  V NN   +N +GIR SVG  DNV + N +  ++ Y++Y Y G D   VV+SG            SG    ++L  +  T+F+ N   + K + FE  D   TL+ GN+   G S   T  SC +  SD  +  VC
Sbjct:   62 TRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFE--DCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499          
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 3.860e-87
Identity = 167/438 (38.13%), Postives = 238/438 (54.34%), Query Frame = 0
Query:    4 THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGV-AGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNA-FPSGMSHTPTSSCLNSASDVDFGEVC 427
            T GGC  L  I + L   +PLY ++           G W+L E LYV DGITL+ +GT+ GG+ + L+L S S   +N+RAHGGSLD +STK  +WD +     +D    RSYISA+SE++ DS E+C+G AK +MGEARMD+E S++AYLG + SES+GL+WK+RG C D  N + ++ + VYGNI +S+ HH  +G Y+Y H    +  N +H +  YGFDPHD S  +TI  N V                           S+  VG F     D + +  N    NGD+G    ES +  V NN   +N +G+R SVG  DNV + NV+ D++ Y++Y Y G D+  VV+SG    N+F  N  +G    ++L  +  T+F+ N   +       D+  TL+ GN    S        +C +  SD D+  VC
Sbjct:   65 TRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP41_ECTSI1.060e-17258.29Mannuronan C-5-epimerase (Partial) (Fragment) n=2 ... [more]
A0A6H5KU33_9PHAE4.240e-16255.78MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FXE4_ECTSI3.300e-10743.30Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.610e-10546.02Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE9.240e-10041.95Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
O39824_9PHYC1.370e-9763.68GP-1 (Fragment) n=4 Tax=Phaeovirus TaxID=181085 Re... [more]
Q7XAJ7_9PHAE3.890e-9642.44Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE5_ECTSI1.990e-9246.29Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA5.210e-9040.00Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAK2_9PHAE3.860e-8738.13Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 315..335
e-value: 3400.0
score: 3.5
coord: 221..243
e-value: 1.8
score: 17.6
coord: 245..267
e-value: 1600.0
score: 5.9
coord: 292..313
e-value: 11.0
score: 14.9
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 174..306
e-value: 2.1E-11
score: 43.5
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 4..361
e-value: 5.7E-72
score: 244.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 201..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11395contigEcto-sp13_S_contig11395:2573..3892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11395.1219.1mRNA_Ecto-sp13_S_contig11395.1219.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11395 2462..3892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11395.1219.1 ID=prot_Ecto-sp13_S_contig11395.1219.1|Name=mRNA_Ecto-sp13_S_contig11395.1219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=440bp
MDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNY
GTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSD
SGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEAS
ESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLN
AVYGNAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALV
TNNHVLSNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNN
TVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSP
MRNVFFQNVFSGVAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGN
AFPSGMSHTPTSSCLNSASDVDFGEVCSDAAITSPSGQSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence