mRNA_Ecto-sp13_S_contig11395.1219.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D8LP41_ECTSI (Mannuronan C-5-epimerase (Partial) (Fragment) n=2 Tax=root TaxID=1 RepID=D8LP41_ECTSI) HSP 1 Score: 549 bits (1414), Expect = 4.670e-189 Identity = 278/471 (59.02%), Postives = 343/471 (72.82%), Query Frame = 1
Query: 1 GVPANTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTSSCLNSASDVDFGEVCSDAAI 1407
G ANTP+PKP+CD+SK +SV RYSSTS+RI LES+DG+ GGCA+ T +HE+LG SPL+PLETPGEWML E L+VLDGITL YGT++GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D DGRS++SAISEV++D++E C GSAKN MGEARMD+E +IA+LG E +ESWG+SWKLRG+C DK N D YEG+GVYGN+L SE H L+YG Y YR A+ N+V+++E+YGFDPHD S+ +TISHN V+ + NHG++++KYCH+A SG F ESS G VYNNTVR N HGIRFSVGSR NV+A N E N+GYDLYQYAG DEVV V+SG+P NV + N+FSG V G RLD S+DTQ + N W EM DS NTLV GN+FP M +T + SC+NSASDV FGEVC+DAAI
Sbjct: 20 GAQANTPIPKPICDSSKEISV---RYSSTSKRIYLESIDGSRGGCASPTMVHEALGDASPLFPLETPGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSVNITISHNDVYFNFNHGVIWSKYCHNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVAENTFEANSGYDLYQYAGSDEVVEVDSGNPTGNVIYANLFSGNVGGARLDDSIDTQLIINSVEDWASIEMVDSMNTLVQGNSFPDDMMYTSSGSCINSASDVSFGEVCTDAAI 487
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE) HSP 1 Score: 533 bits (1373), Expect = 9.370e-179 Identity = 273/478 (57.11%), Postives = 341/478 (71.34%), Query Frame = 1
Query: 1 GVPANTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVY-GNAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTSSCLNSASDVDFGEVCSDAAITSPSGQS 1428
G ANTP+PKPVCDAS+ VSV RYSSTSQRI +ES+DG+ GGCA+ T ++E+LG SPL+PLETPGEWML E LYVLDGIT +GT+ GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D DGRSY+SAISEV++D++E C GSAK MGEARMD++ +IA+LG E ESWG+SWKLRG+C DK N D YEG+GVYGN+L+S+ H ++YG Y YR A+ GN+V+++E+YGFDPHD S+ +TISHN V+ + NHG++++KYCH+A SG F ESS G VYNNTVR N HGIRFSVGSR NV+A N E+N G+DLYQYAG+D VV V+SG+P NV F N FSG G RLD SV TQ V+N W F+M DS NTL+ GN FP M +T + SC+NSASDV FG++C++AA P QS
Sbjct: 315 GAMANTPIPKPVCDASREVSV---RYSSTSQRIYIESVDGSRGGCASPTTVYEALGDASPLHPLETPGEWMLTESLYVLDGITFNLHGTDAGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSYLSAISEVVLDASETCVGSAKEDMGEARMDIQNCEIAFLGYEEVESWGISWKLRGVCNDKSNLDLYEGVGVYGNLLDSDVHDMYYGHYGYRQSFALLSGNSVYNNEVYGFDPHDDSVNITISHNEVYFNFNHGVIWSKYCHNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVADNTFEENTGHDLYQYAGNDAVVEVDSGNPTSNVIFANQFSGNTGGARLDDSVGTQLVANTVEDWASFDMGDSVNTLIEGNTFPVDMMYTSSGSCINSASDVTFGDICTNAAAIDPFDQS 789
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 358 bits (919), Expect = 1.580e-115 Identity = 211/485 (43.51%), Postives = 286/485 (58.97%), Query Frame = 1
Query: 13 NTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDG-THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGVAG-LRLDYSVDTQFVSN-----DAVKWVDFEMRDSTNTLVLGNAFPSGMSH------TPTSSCLNSASDVDFGEVC 1392
N P+ KP CD+ VS+ RY+ T++R+ LES DG T GGCA L +I ES +PLY ++ G W+L E LYV DGITLK YGT+ GGD D L+L S S +N+RAHGGSLD + TK SWD +T D D DGRSYISA+SE++ D E CEG+AKN+MGEARMD+E S+I YLG + SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HHL +G Y+Y H + N +HD+ YGFDPHD S +TI N V+N+G HGI+ +K C+ + N V + G F D + + N + +NGD+G ES + V NT NN +G+R SVG DNV + N++ +N+ Y+ Y Y G DE VV SG NVF QN FSG +++ + TQF+ N DA V D+ N+++ GN G+ SC + SD + VC
Sbjct: 35 NDPISKPDCDSDIEVSI---RYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLV-VRFDDAMNSVMQGNT---GLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 342 bits (876), Expect = 3.960e-109 Identity = 188/409 (45.97%), Postives = 250/409 (61.12%), Query Frame = 1
Query: 67 SVRYSSTSQRI*LESMDG--THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGVAG-LRLDYSVDTQFVSN 1248
S+RY+ T+ R+ LES D T GGC L +I ES PLY ++ G W+L E LYV DGITLK YG+ GGD D L+L S + +N+RAHGGSLD +STK SWD +T D D DGRSYISAISE++ D E CEG+AKN+MGEARMD+E S+I YLG SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HH+ +G Y+Y H + N +HD+ YGFDPHD S +TI N V+N+G HGI+ +K C+ + N V + G F D + + N + +NGD+G ES + V NT NN +G+RFSVG DNV + N + +N Y+ Y Y G DE VV SG NVF QN FSG +++ + TQF+ N
Sbjct: 45 SIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDN 453
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 333 bits (855), Expect = 1.950e-106 Identity = 188/443 (42.44%), Postives = 266/443 (60.05%), Query Frame = 1
Query: 25 PKPVCDASKSVSVSSVRYSSTSQRI*LESMDG-THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQN-VFSGVAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGN 1311
PKP CD+S +VSV RY++ S R+ +ES +G T GGC L +I E SPLY ++ G W+L E +YV DGITL+ +G + GGD D L+L S S +++RA+GGSLD +STK +WD + D D DGRSYISA+SEV+ D + C G AKN+MGEARMD+E S++AYLG +E++GL+WK+RG CVDK N + ++ + VYGNI +S+ HH +G Y+Y H + N +HD+ YGFDPHD S +TI N VWN+G HGI+ +K C+ + N V S+ G F D+ + N + +NGD+G ES + V +NT NN +G+R SVG N+ + NV+ + ++ + Y G D+ VV+SG NVF +N + GV + L + TQF+ N D+T TL+ GN
Sbjct: 6 PKPDCDSSIAVSV---RYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 332 bits (850), Expect = 2.390e-105 Identity = 193/447 (43.18%), Postives = 258/447 (57.72%), Query Frame = 1
Query: 13 NTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDG-THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQN-VFSGVAGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGN 1311
N P+PKP CD S +VS+ RYSS +R+ LES D T GGC L +I E +PLY +++ G W+L E L+V DGITLK +GT+ GGD D L+L S S +N+RAHGGSLD +STK +WD + D D DGRSY+SA+SEV+ D ++ C G AKN+MGEARMD+E S++ YLG SES+GL+WK+RG CVDK N D +E + VYGNI +S+ HH +G Y+Y H + N +HD+ YGFDPHD S +TI N V+++G HGI+ +K C+ + N V + G F D+G ES + V +N NN +GIRFSVGS NV NV+ + Y Y Y G D VV+SG NVF +N + GV ++L + TQF+ N D+ TL+ GN
Sbjct: 28 NEPIPKPECDESIAVSI---RYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: O39824_9PHYC (GP-1 (Fragment) n=4 Tax=Phaeovirus TaxID=181085 RepID=O39824_9PHYC) HSP 1 Score: 307 bits (787), Expect = 1.210e-99 Identity = 147/229 (64.19%), Postives = 186/229 (81.22%), Query Frame = 1
Query: 94 RI*LESMDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASL 777
RI LES+DG+ GGCA+ T I+E+LG SPL+PLET GEWML E L+VLDGITL YGT++GGD DY+KLRSDS + V++RAHGGSLDL++TK TSWD + GD D+D DGRS++SAISEV++D++E C GSAKN MGEARMD+E +IA+LG E +ESWG+SWKLRG+C DK N D YEG+GVYGN+L SE H L+YG Y YR A+ N+V+++E+YGFDPHD S+
Sbjct: 1 RIYLESVDGSRGGCASPTTIYEALGDASPLFPLETAGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSV 229
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 313 bits (801), Expect = 5.160e-98 Identity = 194/477 (40.67%), Postives = 271/477 (56.81%), Query Frame = 1
Query: 13 NTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDG-THGGCAALTRIHESLGPLSPLYPLETP---------GEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVLSNYG--VGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSG-VAGLRLDYSVDTQFVSND--AVKWVDFEMRDSTNTLVLGNAFPSGMSHTPTS-SCLNSASDVDFGEVC 1392
N + KP C +S VS+ RYS TS+R+ LES DG T GGC L I L +PLY ++ G W+L E LYV DGITL+ +G + GG D L+L S S +N+RAHGGSLD +STK +WD + +D GRSYISA+SEV+ DS ++C+G AK +MGEARMD+E S++AYLG SES+GL+WK+RG+C D N + ++ + VYGNI +S+ HH ++G Y+Y H + N +H + YGFDPHD S +TI N V+N+GNHGI+ +K C+ VG F D + + N + +NGD+G E+ + V NN +N +GIR SVG DNV + N + ++ Y++Y Y G D VV+SG SG ++L + T+F+ N + K + FE D TL+ GN+ G S T SC + SD + VC
Sbjct: 28 NKAIAKPSCKSSTKVSI---RYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFE--DCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 303 bits (777), Expect = 1.140e-95 Identity = 164/357 (45.94%), Postives = 222/357 (62.18%), Query Frame = 1
Query: 67 SVRYSSTSQRI*LESMDG--THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDN 1095
S+RY+ ++ R+ LES D T GGC L +I ES PLY ++ G W+L E LYV DGITL+ YG+ GGD D L+L S + +N+RAHGGSLD +STK SWD +T D D DGRSYISAISE++ D E CEG+AKN+MGEARMD+E S+I YLG SES+GL+WK+RG C DK N + ++ + VYGN+ +S+ HH+ +G Y+Y H + N +HD+ YGFDPHD S +TI N V+N+G HGI+ +K C+ + N V + G F D + + N + +NGD+G ES + V NT NN +G+RFSVG DNV + N + +N
Sbjct: 45 SIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNN 401
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 304 bits (779), Expect = 1.090e-94 Identity = 184/475 (38.74%), Postives = 262/475 (55.16%), Query Frame = 1
Query: 13 NTPVPKPVCDASKSVSVSSVRYSSTSQRI*LESMDG-THGGCAALTRIHESLGPLSPLYPLE---------TPGEWMLDEYLYVLDGITLKNYGTNIGGDCDYLKLRSDSSVIVNVRAHGGSLDLMSTKFTSWDPATGDADSDSGDGRSYISAISEVLVDSAEECEGSAKNSMGEARMDVEGSDIAYLGMEASESWGLSWKLRGICVDKFNRDSYEGIGVYGNILNSETHHLFYGQYSYRHLNAVYG-NAVHDDEIYGFDPHDASLGVTISHNTVWNDGNHGIMFAKYCHDALVTNNHVL--SNYGVGFFAQLVGDSSQIMHNMIEENGDSGTGFSESSDGFVYNNTVRNNAHGIRFSVGSRDNVIAANVMEDNNGYDLYQYAGDDEVVVVESGSPMRNVFFQNVFSGV-AGLRLDYSVDTQFVSNDAVKWVDFEMRDSTNTLVLGNA-FPSGMSHTPTSSCLNSASDVDFGEVC 1392
N + KP C +S VS+ RYS++S+R+ LES DG T GGC L I + L +PLY ++ G W+L E LYV DGITL+ +GT+ GG+ + L+L S S +N+RAHGGSLD +STK +WD + +D RSYISA+SE++ DS E+C+G AK +MGEARMD+E S++AYLG + SES+GL+WK+RG C D N + ++ + VYGNI +S+ HH +G Y+Y H + N +H + YGFDPHD S +TI N V S+ VG F D + + N NGD+G ES + V NN +N +G+R SVG DNV + NV+ D++ Y++Y Y G D+ VV+SG N+F N +G ++L + T+F+ N + D+ TL+ GN S +C + SD D+ VC
Sbjct: 31 NKAISKPSCKSSTKVSI---RYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11395.1219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11395.1219.1 >prot_Ecto-sp13_S_contig11395.1219.1 ID=prot_Ecto-sp13_S_contig11395.1219.1|Name=mRNA_Ecto-sp13_S_contig11395.1219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=440bp MDGTHGGCAALTRIHESLGPLSPLYPLETPGEWMLDEYLYVLDGITLKNYback to top mRNA from alignment at Ecto-sp13_S_contig11395:2462..3892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11395.1219.1 ID=mRNA_Ecto-sp13_S_contig11395.1219.1|Name=mRNA_Ecto-sp13_S_contig11395.1219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1431bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11395:2462..3892+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11395:2462..3892+ >mRNA_Ecto-sp13_S_contig11395.1219.1 ID=mRNA_Ecto-sp13_S_contig11395.1219.1|Name=mRNA_Ecto-sp13_S_contig11395.1219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1320bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11395:2462..3892+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |