prot_Ecto-sp13_S_contig11389.1214.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11389.1214.1
Unique Nameprot_Ecto-sp13_S_contig11389.1214.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11389.1214.1 vs. uniprot
Match: D7FPX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX3_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.700e-12
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:   79 RHRVEAPSEGTVTGNVRAVYEDMSAGILNRWGAEYEDT-LFSDAMAWGADGGQVVKDKMLNAVLEQDSFVAAFTGERYRLAH 159
            +H   A   G V  N R+VY ++S+ IL RWG +Y +T LFS  M + +DGG+VV++KMLNAV+EQ+ F+AAFTG      H
Sbjct:  155 QHASVAQPPGAVLENARSVYSEISSDILTRWGYKYANTPLFSGGMKF-SDGGKVVENKMLNAVVEQEGFLAAFTGVSTTAGH 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11389.1214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPX3_ECTSI3.700e-1248.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11389contigEcto-sp13_S_contig11389:1365..4280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11389.1214.1mRNA_Ecto-sp13_S_contig11389.1214.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11389 1247..4454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11389.1214.1 ID=prot_Ecto-sp13_S_contig11389.1214.1|Name=mRNA_Ecto-sp13_S_contig11389.1214.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MLNRKVVFRCAGAGVAATIVLLSAAERAITQERGTAVSPLSSLLPPASSS
ELDSDHHNDDGASTAGCEVPYYAIVPERRHRVEAPSEGTVTGNVRAVYED
MSAGILNRWGAEYEDTLFSDAMAWGADGGQVVKDKMLNAVLEQDSFVAAF
TGERYRLAHYVEGGGEKAGGMYAQADRTRVPLGGLAVTVEERIAWILKLL
ARGLEFVGLLW*
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