prot_Ecto-sp13_S_contig11361.1196.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11361.1196.1
Unique Nameprot_Ecto-sp13_S_contig11361.1196.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: D7G810_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G810_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.170e-65
Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
Query:    1 QRTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSIPAFYVFKNGVTVDSVTGSGESKLRKLVADHVGQQQGDGSGASPPD-KKVQ 106
            +RTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSIPAFYVFKNGV VDSVTGSGESKLRKLVADHVGQQQ DGSGASPPD KKVQ
Sbjct:   61 KRTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSIPAFYVFKNGVKVDSVTGSGESKLRKLVADHVGQQQEDGSGASPPDDKKVQ 167          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: UPI00106A16E7 (thioredoxin-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A16E7)

HSP 1 Score: 84.7 bits (208), Expect = 3.620e-19
Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 QRTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDG---TSIPAFYVFKNGVTVDSVTGSGESKLRKLV 84
            +  + L+V+DFTASWC PC+ +AP FE LA E    A  FAKVD+DN  E  +    +++P+F+ +KNG  +DS+TG+ E+KL +L+
Sbjct:   17 EHKDKLVVIDFTASWCGPCKHIAPAFEKLANEYPNVA--FAKVDVDNNSEVAESEGVSAMPSFFFYKNGDKIDSITGANEAKLEELI 101          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A0A6P5AJL9_BRABE (Thioredoxin n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AJL9_BRABE)

HSP 1 Score: 83.2 bits (204), Expect = 1.420e-18
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    4 EPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSI---PAFYVFKNGVTVDSVTGSGESKLRKLVA 85
            + L+VVDFTASWC PCR +AP+FE LA+EN     +F KVD+D   ET     I   P F  +KNG  V+ + G+ E KLR++VA
Sbjct:   20 DKLIVVDFTASWCGPCRMIAPVFEKLAEENPDV--IFVKVDVDANDETAGACGISAMPTFQCYKNGAKVEEMCGASEDKLREMVA 102          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A0A4Z2BNT1_9TELE (Thioredoxin n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2BNT1_9TELE)

HSP 1 Score: 80.9 bits (198), Expect = 1.220e-17
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    6 LLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDG---TSIPAFYVFKNGVTVDSVTGSGESKLRKLV 84
            L+VVDFTA+WC PCR + PIF+ L+K+   A  VF KVD+D +PE  D    T++P F +FK+G  ++++ G+ E+KL   +
Sbjct:   22 LVVVDFTATWCGPCRRIGPIFDALSKKENNANVVFVKVDVDKVPELTDKYKVTAMPTFMLFKDG-NIETIVGANEAKLEAKI 102          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A0A5J9SKP4_9POAL (Thioredoxin n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SKP4_9POAL)

HSP 1 Score: 81.3 bits (199), Expect = 1.270e-17
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    6 LLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPET---FDGTSIPAFYVFKNGVTVDSVTGSGESKLRKLVADHVG 89
            L+++DFTASWC PCR +AP+F  LAK+  GA  VF KVD+D L E    ++  ++P F+  K+G TVD+V G+ + +L+  V  HVG
Sbjct:   30 LVIIDFTASWCGPCRFIAPVFAELAKKFVGA--VFLKVDVDELKEVAAEYNVEAMPTFHYIKDGKTVDTVVGARKDELQAKVEKHVG 114          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A0A8K0ED01_BRALA (TXN protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0ED01_BRALA)

HSP 1 Score: 80.5 bits (197), Expect = 1.630e-17
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    4 EPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSI---PAFYVFKNGVTVDSVTGSGESKLRKLVADH 87
            + L+VVDFTASWC PC+ + P+FE LA+E+     +F KVD+D   ET     I   P F+ +KNG  V+ + G+ E KL+ LVA H
Sbjct:   20 DKLIVVDFTASWCGPCKMIGPVFEKLAEEHSDV--IFVKVDVDANDETAGACGISAMPTFHCYKNGQKVEEMCGASEDKLKALVAKH 104          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: C3Z6B9_BRAFL (Thioredoxin n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z6B9_BRAFL)

HSP 1 Score: 80.5 bits (197), Expect = 1.680e-17
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 QRTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETF---DGTSIPAFYVFKNGVTVDSVTGS-GESKLRKLVADH 87
            +  + L+VVDF A WC PCRAMAP+FE LA EN     +FAKV++    ET    D  SIPAF+ +KNG  VDSV GS  +S+L  LVA++
Sbjct:   17 ESNDKLVVVDFWAQWCAPCRAMAPVFEELANENPDV--IFAKVNVSVNMETAQAADIRSIPAFHFYKNGEKVDSVQGSVPKSELETLVANN 105          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: C3YTF6_BRAFL (Thioredoxin n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTF6_BRAFL)

HSP 1 Score: 80.1 bits (196), Expect = 2.250e-17
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    4 EPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSI---PAFYVFKNGVTVDSVTGSGESKLRKLVA 85
            + L+VVDFTASWC PC+ +AP+FE LA++N     +F KVD+D   ET     I   P F+ +KNG  VD +TG+ + KL ++VA
Sbjct:   19 DKLIVVDFTASWCGPCKMIAPVFEKLAEDNTDV--IFVKVDVDANDETAGACGISAMPTFHCYKNGDKVDEMTGASKDKLIEMVA 101          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A0A420JCJ6_9PEZI (Thioredoxin n=1 Tax=Golovinomyces cichoracearum TaxID=62708 RepID=A0A420JCJ6_9PEZI)

HSP 1 Score: 80.1 bits (196), Expect = 3.090e-17
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0
Query:    2 RTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSI---PAFYVFKNGVTVDSVTGSGESKLRKLVADHV 88
            ++  LL++DF+A WC PC+A+ P FE LA EN   + +FAK D+D   +      I   P F  F+NG  VDS+ GS  SKL   V  +V
Sbjct:   15 KSSSLLIIDFSAEWCGPCKAIGPFFERLASENASTSIIFAKCDVDQAEDVSKACQIRAMPTFKFFRNGKEVDSLVGSDPSKLESAVERYV 104          
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Match: A7RQN2_NEMVE (Thioredoxin n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQN2_NEMVE)

HSP 1 Score: 79.3 bits (194), Expect = 4.410e-17
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    9 VDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDG---TSIPAFYVFKNGVTVDSVTGSGESKLRKLVADH 87
            +DFTA+WC PCR + P FE +AKE KG     AKVD+D   ET +    T++P F  +KNG  VD V G+ ESKL++L A H
Sbjct:   22 IDFTATWCGPCRMIGPKFEEMAKEFKGVKC--AKVDVDVNSETAESEGITAMPTFRFYKNGEMVDEVVGASESKLKELFAKH 101          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11361.1196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G810_ECTSI1.170e-6596.26Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
UPI00106A16E73.620e-1945.98thioredoxin-like n=1 Tax=Dendronephthya gigantea T... [more]
A0A6P5AJL9_BRABE1.420e-1849.41Thioredoxin n=3 Tax=Branchiostoma TaxID=7737 RepID... [more]
A0A4Z2BNT1_9TELE1.220e-1745.12Thioredoxin n=1 Tax=Takifugu bimaculatus TaxID=433... [more]
A0A5J9SKP4_9POAL1.270e-1747.13Thioredoxin n=1 Tax=Eragrostis curvula TaxID=38414... [more]
A0A8K0ED01_BRALA1.630e-1745.98TXN protein n=1 Tax=Branchiostoma lanceolatum TaxI... [more]
C3Z6B9_BRAFL1.680e-1751.65Thioredoxin n=2 Tax=Branchiostoma floridae TaxID=7... [more]
C3YTF6_BRAFL2.250e-1747.06Thioredoxin n=1 Tax=Branchiostoma floridae TaxID=7... [more]
A0A420JCJ6_9PEZI3.090e-1742.22Thioredoxin n=1 Tax=Golovinomyces cichoracearum Ta... [more]
A7RQN2_NEMVE4.410e-1750.00Thioredoxin n=1 Tax=Nematostella vectensis TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 4..84
e-value: 1.1E-17
score: 63.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..89
score: 9.868
NoneNo IPR availableGENE3D3.40.30.10coord: 1..94
e-value: 6.4E-23
score: 82.6
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 4..98
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 4..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11361contigEcto-sp13_S_contig11361:9..722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11361.1196.1mRNA_Ecto-sp13_S_contig11361.1196.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11361 9..722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11361.1196.1 ID=prot_Ecto-sp13_S_contig11361.1196.1|Name=mRNA_Ecto-sp13_S_contig11361.1196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
QRTEPLLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPE
TFDGTSIPAFYVFKNGVTVDSVTGSGESKLRKLVADHVGQQQGDGSGASP
PDKKVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf