prot_Ecto-sp13_S_contig11312.1166.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11312.1166.1
Unique Nameprot_Ecto-sp13_S_contig11312.1166.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11312.1166.1 vs. uniprot
Match: D7FUH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH8_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 4.850e-57
Identity = 113/187 (60.43%), Postives = 114/187 (60.96%), Query Frame = 0 
Query:    4 QTFVDQGYTEDEVREALVSQNEACPTFSLTECQRQVFRGSISSLSVCDNTTEGVDCSTVGSLEPVRCMEESEYPTDLWQNTDFAGWDYTQRTCCGSNFTSTSMEPSCSISDGEDDSGGGGSTEGANIGVGLAGGVAVAVGLILTALYFVHRKKKRNRSPKRDRDTTVAEAVGPPENAPRILDAEVRQ 190
            QTFVDQGYTEDEVREAL SQNEACPTFSLTECQRQ  R       + D    G          PV                    WDYTQRTCCGSNFTSTS EPSC               EGANI            GLILTALYFVHRKKKRNRSPKRDRDTTVAEAVGPPENAPRILDAEVRQ
Sbjct:    6 QTFVDQGYTEDEVREALESQNEACPTFSLTECQRQCVRQHHRGRGLLDGRQPGA--------RPVH--------------GGIGMWDYTQRTCCGSNFTSTSTEPSCXXXXXXXXXXXXXXMEGANIXXXXXXXXXXXXGLILTALYFVHRKKKRNRSPKRDRDTTVAEAVGPPENAPRILDAEVRQ 170
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11312.1166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH8_ECTSI4.850e-5760.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..129
NoneNo IPR availableTMHMMTMhelixcoord: 130..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11312contigEcto-sp13_S_contig11312:774..4967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11312.1166.1mRNA_Ecto-sp13_S_contig11312.1166.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11312 774..4967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11312.1166.1 ID=prot_Ecto-sp13_S_contig11312.1166.1|Name=mRNA_Ecto-sp13_S_contig11312.1166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MRQQTFVDQGYTEDEVREALVSQNEACPTFSLTECQRQVFRGSISSLSVC
DNTTEGVDCSTVGSLEPVRCMEESEYPTDLWQNTDFAGWDYTQRTCCGSN
FTSTSMEPSCSISDGEDDSGGGGSTEGANIGVGLAGGVAVAVGLILTALY
FVHRKKKRNRSPKRDRDTTVAEAVGPPENAPRILDAEVRQ*
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