prot_Ecto-sp13_S_contig1131.1163.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1131.1163.1
Unique Nameprot_Ecto-sp13_S_contig1131.1163.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1131.1163.1 vs. uniprot
Match: A0A6H5KL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL95_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 1.970e-77
Identity = 151/174 (86.78%), Postives = 157/174 (90.23%), Query Frame = 0 
Query:   35 RRGNKDHLSG----PSIIVARLLASSAHELRRRASQLKALLSAIEKKAGADATAAAVESGGPPLALKDRFNLLLQDAAQALRSGLVAPPLTGPEAEKGTVESELAPTKSKELAAAAEAPGSSSDQQEVIALTVDNVEAVAGVFNTDIGVDVENEQLCRFLRAATTTTTKISASP 204
            + G K  LSG    PSI+VAR+L+SSA  LRRRASQLKALLSAIEKK  ADATAAAVESGGPPLALKDRFNLLLQDAAQALRSGLVAPPLTGPEAEKGTVES LAPTKSKE AAAAEAPGSSSDQ+ V+ALTVDNV AV GVFNTDIGVDVENEQLCRFLRAATTTTTKISASP
Sbjct: 3413 KTGQKGPLSGSEFGPSILVARVLSSSADGLRRRASQLKALLSAIEKKRSADATAAAVESGGPPLALKDRFNLLLQDAAQALRSGLVAPPLTGPEAEKGTVESGLAPTKSKEPAAAAEAPGSSSDQEAVMALTVDNVGAVEGVFNTDIGVDVENEQLCRFLRAATTTTTKISASP 3586
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BLAST of mRNA_Ecto-sp13_S_contig1131.1163.1 vs. uniprot
Match: D7FND1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND1_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.700e-54
Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0 
Query:   54 ASSAHELRRRASQLKALLSAIEKKAGADATAAAVESGGPPLALKDRFNLLLQDAAQALRSGLVAPPLTGPEAEKGTVESELAPTKSKELAAAAEAPGSSSDQQEVIALTVDNVEAVAGVFNTDIGVDVENEQLCRFLRAATTTTTKISASP 204
            ASS H      S  +ALLSAIEKK  A A AAA E GGP LALKDRFNLLL DAAQALRSGLVAPPLTGPE EK TVES       KE  AAA APGSS D+ EV+ LTV+NVEAV GVFNTDIGVDVENEQLCRFLR+ATTTTTKISASP
Sbjct:  205 ASSLHP----PSAPEALLSAIEKKTSAKAIAAAAEPGGPLLALKDRFNLLLHDAAQALRSGLVAPPLTGPEVEKETVES-------KEPPAAAAAPGSSPDKNEVMTLTVENVEAVEGVFNTDIGVDVENEQLCRFLRSATTTTTKISASP 344
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1131.1163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL95_9PHAE1.970e-7786.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FND1_ECTSI2.700e-5474.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1131contigEcto-sp13_S_contig1131:6537..7710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1131.1163.1mRNA_Ecto-sp13_S_contig1131.1163.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1131 5140..7998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1131.1163.1 ID=prot_Ecto-sp13_S_contig1131.1163.1|Name=mRNA_Ecto-sp13_S_contig1131.1163.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
MVPTTTEIKRLRGCTQPGLRSSFWAPVSLMLQTRRRGNKDHLSGPSIIVA
RLLASSAHELRRRASQLKALLSAIEKKAGADATAAAVESGGPPLALKDRF
NLLLQDAAQALRSGLVAPPLTGPEAEKGTVESELAPTKSKELAAAAEAPG
SSSDQQEVIALTVDNVEAVAGVFNTDIGVDVENEQLCRFLRAATTTTTKI
SASP*
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